Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : N09

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 41


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 O4 O O4 N N N 0 5.571 1.143 -2.173
2 C22 C C22 N N N 0 5.019 0.732 -1.17
3 C17 C C17 N Y N 0 3.87 1.426 -0.575
4 C16 C C16 N Y N 0 3.393 2.73 -0.636
5 C26 C C26 N Y N 0 4.789 -2.565 0.193
6 C25 C C25 N Y N 0 3.873 -3.398 0.801
7 C24 C C24 N Y N 0 2.665 -2.905 1.269
8 N3 N N3 N Y N 0 2.313 2.806 0.102
9 O3 O O3 N N N 0 5.426 -0.398 -0.538
10 C20 C C20 N Y N 0 4.51 -1.213 0.037
11 C23 C C23 N Y N 0 2.362 -1.567 1.123
12 C19 C C19 N Y N 0 3.273 -0.72 0.501
13 C18 C C18 N Y N 0 2.99 0.697 0.263
14 N2 N N2 N Y N 0 2.046 1.548 0.672
15 C13 C C13 N N N 0 0.928 1.228 1.562
16 C11 C C11 N N N 0 -0.253 0.776 0.742
17 O2 O O2 N N N 0 -0.168 0.727 -0.467
18 N1 N N1 N N N 0 -1.403 0.427 1.351
19 C4 C C4 N Y N 0 -2.53 0.101 0.587
20 C3 C C3 N Y N 0 -2.38 -0.566 -0.622
21 C2 C C2 N Y N 0 -3.492 -0.893 -1.374
22 C5 C C5 N Y N 0 -3.798 0.44 1.039
23 C6 C C6 N Y N 0 -4.911 0.115 0.28
24 C1 C C1 N Y N 0 -4.756 -0.557 -0.926
25 CL CL CL N N N 0 -6.15 -0.969 -1.874
26 O1 O O1 N N N 0 -6.154 0.445 0.72
27 C8 C C8 N N N 0 -6.239 1.125 1.973
28 H1 H H1 N N N 0 3.837 3.541 -1.195
29 H2 H H2 N N N 0 5.727 -2.966 -0.162
30 H3 H H3 N N N 0 4.1 -4.448 0.913
31 H4 H H4 N N N 0 1.961 -3.568 1.749
32 H5 H H5 N N N 0 1.423 -1.18 1.489
33 H6 H H6 N N N 0 1.223 0.43 2.244
34 H7 H H7 N N N 0 0.654 2.114 2.135
35 H8 H H8 N N N 0 -1.451 0.402 2.32
36 H9 H H9 N N N 0 -1.393 -0.829 -0.974
37 H10 H H10 N N N 0 -3.373 -1.412 -2.314
38 H11 H H11 N N N 0 -3.917 0.954 1.981
39 H12 H H12 N N N 0 -7.284 1.329 2.206
40 H13 H H13 N N N 0 -5.807 0.501 2.756
41 H14 H H14 N N N 0 -5.69 2.065 1.915