Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : MXZ

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 26


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C1 C C1 R N N 0 1.342 -0.23 0.38
2 C2 C C2 S N N 0 -0.04 -0.226 1.035
3 C3 C C3 R N N 0 -0.963 0.714 0.252
4 C4 C C4 S N N 0 -0.94 0.305 -1.225
5 C5 C C5 S N N 0 0.511 0.261 -1.709
6 O1 O O1 N N Y 0 1.867 1.098 0.371
7 O2 O O2 N N N 0 0.07 0.227 2.385
8 O3 O O3 N N N 0 -2.297 0.616 0.755
9 O4 O O4 N N N 0 -1.533 -0.985 -1.374
10 O5 O O5 N N N 0 1.24 -0.708 -0.959
11 CM C CM N N N 0 0.292 -0.929 3.193
12 C6 C C6 N N N 0 0.54 -0.114 -3.192
13 H1 H H1C1 N N N 0 2.009 -0.88 0.946
14 H2 H H2 N N N 0 -0.453 -1.235 1.023
15 H3 H H3 N N N 0 -0.608 1.739 0.354
16 H4 H H4 N N N 0 -1.498 1.033 -1.813
17 H5 H H5 N N N 0 0.967 1.242 -1.575
18 HO1 H H1 N N Y 0 2.737 1.052 -0.048
19 HO3 H HA N N Y 0 -2.84 1.215 0.226
20 HO4 H HB N N Y 0 -1.492 -1.205 -2.314
21 HMC1 H HMC1 N N N 0 0.384 -0.631 4.238
22 HMC2 H HMC2 N N N 0 -0.547 -1.615 3.084
23 HMC3 H HMC3 N N N 0 1.209 -1.425 2.875
24 H61 H H6C1 N N N 0 1.572 -0.141 -3.539
25 H62 H H6C2 N N N 0 0.085 -1.096 -3.326
26 H63 H H6C3 N N N 0 -0.017 0.626 -3.765