Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : MED

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 20


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 N N N N N N 0 -1.228 1.83 0.137
2 CA C CA R N N 0 -1.222 0.404 0.489
3 C C C N N N 0 -2.505 -0.234 0.023
4 O O O N N N 0 -3.167 0.298 -0.836
5 CB C CB N N N 0 -0.035 -0.283 -0.189
6 CG C CG N N N 0 1.271 0.28 0.377
7 SD S SD N N N 0 2.679 -0.535 -0.427
8 CE C CE N N N 0 4.11 0.251 0.363
9 OXT O OXT N N Y 0 -2.912 -1.394 0.562
10 H H H N N N 0 -0.408 2.295 0.495
11 H2 H HN2 N N Y 0 -1.308 1.956 -0.861
12 HA H HA N N N 0 -1.135 0.297 1.57
13 HB2 H HB1 N N N 0 -0.08 -1.356 -0.001
14 HB3 H HB2 N N N 0 -0.074 -0.101 -1.263
15 HG2 H HG1 N N N 0 1.316 1.352 0.189
16 HG3 H HG2 N N N 0 1.31 0.097 1.451
17 HE1 H HE1 N N N 0 4.084 1.325 0.175
18 HE2 H HE2 N N N 0 4.078 0.07 1.437
19 HE3 H HE3 N N N 0 5.028 -0.168 -0.05
20 HXT H HXT N N Y 0 -3.741 -1.765 0.23