Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : M9H

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 42


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 O1 O O1 N N N 0 -4.56 0.886 1.541
2 C1 C C1 N N N 0 -4.37 0.497 0.408
3 N1 N N1 N N N 0 -3.235 -0.164 0.104
4 C2 C C2 N N N 0 -2.229 -0.407 1.141
5 C3 C C3 N Y N 0 -1.066 -1.159 0.546
6 C4 C C4 N Y N 0 -0.002 -0.466 0.001
7 C5 C C5 N Y N 0 1.065 -1.155 -0.545
8 C6 C C6 N N N 0 2.226 -0.4 -1.139
9 N2 N N2 N N N 0 3.231 -0.155 -0.102
10 C7 C C7 N N N 0 4.364 0.509 -0.406
11 C8 C C8 N N N 0 5.398 0.761 0.66
12 N3 N N3 N N N 0 6.53 1.497 0.081
13 C9 C C9 N N N 0 7.561 1.762 1.094
14 O2 O O2 N N N 0 4.551 0.904 -1.538
15 C10 C C10 N Y N 0 1.067 -2.538 -0.545
16 C11 C C11 N Y N 0 0.002 -3.231 0.001
17 C12 C C12 N Y N 0 -1.062 -2.541 0.551
18 C13 C C13 N N N 0 -5.405 0.747 -0.659
19 N4 N N4 N N N 0 -6.541 1.474 -0.078
20 C14 C C14 N N N 0 -7.572 1.736 -1.091
21 H1 H H1 N N N 0 -3.085 -0.478 -0.801
22 H2 H H2 N N N 0 -1.88 0.546 1.539
23 H3 H H3 N N N 0 -2.671 -0.997 1.944
24 H4 H H4 N N N 0 -0.003 0.614 0.002
25 H5 H H5 N N N 0 2.668 -0.988 -1.943
26 H6 H H6 N N N 0 1.874 0.552 -1.537
27 H7 H H7 N N N 0 3.082 -0.471 0.803
28 H8 H H8 N N N 0 4.956 1.349 1.464
29 H9 H H9 N N N 0 5.75 -0.191 1.058
30 H10 H H10 N N N 0 6.917 1.002 -0.708
31 H12 H H12 N N N 0 7.927 0.816 1.494
32 H13 H H13 N N N 0 8.386 2.308 0.638
33 H14 H H14 N N N 0 7.133 2.357 1.901
34 H15 H H15 N N N 0 1.898 -3.076 -0.975
35 H16 H H16 N N N 0 0.004 -4.311 0.001
36 H17 H H17 N N N 0 -1.894 -3.082 0.977
37 H18 H H18 N N N 0 -4.964 1.341 -1.46
38 H19 H H19 N N N 0 -5.75 -0.205 -1.061
39 H20 H H20 N N N 0 -6.237 2.332 0.359
40 H22 H H22 N N N 0 -7.932 0.791 -1.496
41 H23 H H23 N N N 0 -8.402 2.276 -0.634
42 H24 H H24 N N N 0 -7.147 2.337 -1.895