Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : M8X

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 50


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C10 C C1 N N N 0 5.226 0.942 -1.357
2 C13 C C2 N Y N 0 -2.349 -0.962 -0.744
3 C17 C C3 N Y N 0 -5.254 0.831 0.461
4 C20 C C4 N Y N 0 -3.615 2.549 0.074
5 C21 C C5 N Y N 0 -2.705 1.618 -0.343
6 C22 C C6 N Y N 0 -3.055 0.265 -0.366
7 C01 C C7 N N N 0 -0.148 -2.168 0.758
8 C03 C C8 N N N 0 1.383 -0.849 -0.576
9 C04 C C9 N N N 0 2.289 -0.533 0.616
10 C05 C C10 N N N 0 3.733 -0.382 0.134
11 C06 C C11 N N N 0 4.655 -0.227 1.36
12 C07 C C12 N N N 0 6.058 -0.588 0.953
13 C08 C C13 N N N 0 6.885 0.642 0.533
14 C09 C C14 N N N 0 6.084 1.634 -0.332
15 C11 C C15 N N N 0 3.813 0.757 -0.768
16 C12 C C16 N N N 0 -0.933 -1.062 -1.248
17 C14 C C17 N Y N 0 -3.202 -1.981 -0.55
18 C16 C C18 N Y N 0 -4.34 -0.135 0.039
19 C19 C C19 N Y N 0 -4.886 2.163 0.475
20 N02 N N1 N N N 0 -0.003 -0.993 -0.112
21 N15 N N2 N Y N 0 -4.397 -1.506 -0.085
22 O18 O O1 N N N 0 -6.502 0.463 0.856
23 H1 H H1 N N N 0 5.17 1.552 -2.259
24 H2 H H2 N N N 0 5.654 -0.031 -1.596
25 H3 H H3 N N N 0 -3.342 3.593 0.091
26 H4 H H4 N N N 0 -1.719 1.927 -0.654
27 H5 H H5 N N N 0 0.501 -2.058 1.627
28 H6 H H6 N N N 0 -1.184 -2.251 1.087
29 H7 H H7 N N N 0 0.131 -3.066 0.207
30 H8 H H8 N N N 0 1.442 -0.038 -1.302
31 H9 H H9 N N N 0 1.709 -1.779 -1.042
32 H10 H H10 N N N 0 1.963 0.397 1.083
33 H11 H H11 N N N 0 2.231 -1.343 1.342
34 H12 H H12 N N N 0 4.019 -1.283 -0.409
35 H13 H H13 N N N 0 4.63 0.806 1.709
36 H14 H H14 N N N 0 4.322 -0.893 2.156
37 H15 H H15 N N N 0 6.554 -1.077 1.791
38 H16 H H16 N N N 0 6.013 -1.286 0.116
39 H17 H H17 N N N 0 7.231 1.156 1.429
40 H18 H H18 N N N 0 7.753 0.305 -0.035
41 H19 H H19 N N N 0 6.78 2.297 -0.845
42 H20 H H20 N N N 0 5.445 2.231 0.318
43 H21 H H21 N N N 0 3.536 1.659 -0.223
44 H22 H H22 N N N 0 3.107 0.609 -1.586
45 H23 H H23 N N N 0 -0.799 -2.009 -1.77
46 H24 H H24 N N N 0 -0.732 -0.238 -1.932
47 H25 H H25 N N N 0 -2.977 -3.021 -0.735
48 H26 H H26 N N N 0 -5.594 2.91 0.802
49 H28 H H28 N N N 0 -5.169 -2.054 0.129
50 H29 H H29 N N N 0 -7.152 0.445 0.14