Chemical Components in the PDB

pdbe.org/chem
wwPDB
EMDataBank
spacer

PDBeChem : Atoms of Molecule

 Molecule : M6K

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 48


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C10 C C1 N N N 0 2.099 0.411 -0.195
2 C13 C C2 S N N 0 -0.253 0.26 0.204
3 C02 C C3 N N N 0 7.728 -0.625 0.068
4 C04 C C4 N Y N 0 6.275 -0.353 0.001
5 C05 C C5 N Y N 0 5.705 0.107 -1.187
6 C06 C C6 N Y N 0 4.352 0.355 -1.251
7 C07 C C7 N Y N 0 3.55 0.145 -0.127
8 C08 C C8 N Y N 0 4.121 -0.316 1.062
9 C09 C C9 N Y N 0 5.473 -0.563 1.125
10 C14 C C10 N N N 0 1.109 0.23 0.939
11 C15 C C11 N N N 0 -1.308 0.993 1.036
12 C17 C C12 N N N 0 -3.596 1.785 1.003
13 C18 C C13 N N N 0 -4.915 1.718 0.229
14 C20 C C14 N N N 0 -4.411 -0.555 -0.433
15 C21 C C15 N N N 0 -3.093 -0.488 0.341
16 C22 C C16 N N N 0 -6.7 0.236 -0.465
17 C23 C C17 N N N 0 -7.274 -1.142 -0.258
18 N01 N N1 N N N 0 8.259 -1.06 1.175
19 N03 N N2 N N N 0 8.519 -0.418 -1.041
20 N11 N N3 N N N 0 1.457 0.842 -1.228
21 N16 N N4 N N N 0 -2.611 0.9 0.365
22 N19 N N5 N N N 0 -5.396 0.33 0.205
23 O12 O O1 N N N 0 0.075 1.013 -0.985
24 O24 O O2 N N N 0 -6.659 -1.962 0.383
25 O25 O O3 N N N 0 -8.467 -1.458 -0.785
26 H2 H H2 N N N 0 -0.586 -0.748 -0.043
27 H3 H H3 N N N 0 6.325 0.269 -2.056
28 H4 H H4 N N N 0 3.911 0.712 -2.17
29 H5 H H5 N N N 0 3.501 -0.478 1.931
30 H6 H H6 N N N 0 5.914 -0.924 2.043
31 H7 H H7 N N N 0 1.259 -0.729 1.435
32 H8 H H8 N N N 0 1.182 1.051 1.652
33 H9 H H9 N N N 0 -1.373 0.537 2.023
34 H10 H H10 N N N 0 -1.026 2.042 1.137
35 H11 H H11 N N N 0 -3.222 2.809 0.997
36 H12 H H12 N N N 0 -3.761 1.464 2.031
37 H13 H H13 N N N 0 -5.655 2.352 0.717
38 H14 H H14 N N N 0 -4.755 2.065 -0.792
39 H15 H H15 N N N 0 -4.246 -0.234 -1.461
40 H16 H H16 N N N 0 -4.785 -1.579 -0.428
41 H17 H H17 N N N 0 -3.253 -0.836 1.362
42 H18 H H18 N N N 0 -2.352 -1.122 -0.147
43 H19 H H19 N N N 0 -6.574 0.421 -1.532
44 H20 H H20 N N N 0 -7.378 0.979 -0.046
45 H21 H H21 N N N 0 9.212 -1.238 1.219
46 H22 H H22 N N N 0 8.124 -0.094 -1.866
47 H23 H H23 N N N 0 9.472 -0.596 -0.998
48 H27 H H27 N N N 0 -8.794 -2.354 -0.625