Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : M2M

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 23


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C1 C C1 N N N 0 1.229 0.128 3.802
2 O1 O O1 N N N 0 0.46 0.495 2.655
3 C2 C C2 N N N 0 -0.364 -0.626 2.334
4 C3 C C3 N N N 0 -1.218 -0.297 1.108
5 O2 O O2 N N N 0 -0.366 0.0 0.0
6 C4 C C4 N N N 0 -1.218 0.297 -1.108
7 C5 C C5 N N N 0 -0.364 0.626 -2.334
8 O3 O O3 N N N 0 0.46 -0.495 -2.655
9 C6 C C6 N N N 0 1.229 -0.128 -3.802
10 H11 H 1H1 N N N 0 1.877 0.957 4.085
11 H12 H 2H1 N N N 0 0.558 -0.108 4.628
12 H13 H 3H1 N N N 0 1.837 -0.744 3.566
13 H21 H 1H2 N N N 0 0.264 -1.489 2.117
14 H22 H 2H2 N N N 0 -1.014 -0.852 3.179
15 H31 H 1H3 N N N 0 -1.847 -1.152 0.863
16 H32 H 2H3 N N N 0 -1.847 0.566 1.324
17 H41 H 1H4 N N N 0 -1.847 -0.566 -1.324
18 H42 H 2H4 N N N 0 -1.847 1.153 -0.863
19 H51 H 1H5 N N N 0 -1.014 0.852 -3.179
20 H52 H 2H5 N N N 0 0.264 1.489 -2.117
21 H61 H 1H6 N N N 0 1.877 -0.957 -4.085
22 H62 H 2H6 N N N 0 0.558 0.107 -4.628
23 H63 H 3H6 N N N 0 1.838 0.744 -3.566