Chemical Components in the PDB

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  • NGA (Stereoisomer)
  • BM7 (Stereoisomer)
  • NAA (Stereoisomer)
  • LXZ (Stereoisomer)
  • NDG (Stereoisomer)
  • BM3 (Stereoisomer)
  • A2G (Stereoisomer)
  • HSQ (Stereoisomer)
  • NAG (Stereoisomer)
  • NGZ (Stereoisomer)
  • A1AAJ (Stereoisomer)
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PDBeChem : Atoms of Molecule

 Molecule : LXB

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 30


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 O1 O O1 N N Y 0 -0.891 -2.048 -0.244
2 C1 C C1 R N N 0 -0.136 -0.867 -0.52
3 C2 C C2 R N N 0 -0.774 0.327 0.196
4 C3 C C3 S N N 0 0.075 1.577 -0.056
5 C4 C C4 R N N 0 1.507 1.312 0.419
6 C5 C C5 R N N 0 2.057 0.08 -0.306
7 C6 C C6 N N N 0 3.466 -0.226 0.207
8 C7 C C7 N N N 0 -3.163 -0.153 0.189
9 C8 C C8 N N N 0 -4.555 0.068 -0.343
10 N2 N N2 N N N 0 -2.127 0.542 -0.322
11 O3 O O3 N N N 0 0.082 1.876 -1.453
12 O4 O O4 N N N 0 1.507 1.078 1.828
13 O5 O O5 N N N 0 1.204 -1.038 -0.055
14 O6 O O6 N N N 0 4.024 -1.303 -0.55
15 O7 O O7 N N N 0 -2.974 -0.956 1.078
16 HO1 H HO1 N N Y 0 -0.544 -2.845 -0.667
17 H1 H H1 N N N 0 -0.127 -0.684 -1.595
18 H2 H H2 N N N 0 -0.821 0.127 1.266
19 H3 H H3 N N N 0 -0.343 2.419 0.495
20 H4 H H4 N N N 0 2.131 2.176 0.193
21 H5 H H5 N N N 0 2.095 0.276 -1.378
22 H61 H H6 N N N 0 4.093 0.658 0.097
23 H62 H H6A N N N 0 3.416 -0.509 1.258
24 H81 H H8 N N N 0 -5.254 -0.577 0.188
25 H82 H H8A N N N 0 -4.839 1.11 -0.197
26 H83 H H8B N N N 0 -4.579 -0.168 -1.407
27 HN2 H HN2 N N N 0 -2.278 1.184 -1.033
28 HO3 H HO3 N N Y 0 0.602 2.658 -1.685
29 HO4 H HO4 N N Y 0 2.384 0.902 2.198
30 HO6 H HO6 N N Y 0 4.918 -1.551 -0.279