Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : LH7

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 42


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 N1 N N1 N Y N 0 -1.382 1.021 0.284
2 N3 N N2 N N N 0 2.464 -0.753 -0.039
3 C4 C C1 N Y N 0 -0.11 0.743 0.208
4 C5 C C2 S N N 0 -3.573 -0.282 0.236
5 C6 C C3 N N N 0 -4.105 0.284 1.564
6 C7 C C4 N N N 0 -5.631 0.468 1.447
7 C8 C C5 N N N 0 -4.206 0.569 -0.895
8 C10 C C6 N N N 0 3.719 -1.499 -0.161
9 C13 C C7 N Y N 0 6.523 0.658 1.157
10 C15 C C8 N Y N 0 6.437 0.893 -1.228
11 C1 C C9 N N N 0 -1.607 -2.647 -0.076
12 C11 C C10 N Y N 0 4.881 -0.54 -0.108
13 C12 C C11 N Y N 0 5.458 -0.221 1.107
14 C14 C C12 N Y N 0 7.012 1.219 -0.011
15 C16 C C13 N Y N 0 5.376 0.01 -1.276
16 C2 C C14 N Y N 0 -1.25 -1.188 0.057
17 C3 C C15 N Y N 0 0.023 -0.656 0.062
18 C9 C C16 N N N 0 1.286 -1.407 -0.061
19 F1 F F1 N N N 0 8.05 2.082 0.037
20 N2 N N3 N Y N 0 -2.113 -0.168 0.192
21 O1 O O1 N N N 0 -6.363 2.093 -0.531
22 O2 O O2 N N N 0 -6.72 -0.32 -0.851
23 O3 O O3 N N N 0 1.265 -2.617 -0.182
24 S1 S S1 N N N 0 -5.941 0.75 -0.334
25 H1 H H1 N N N 0 2.481 0.212 0.058
26 H2 H H2 N N N 0 0.7 1.457 0.249
27 H3 H H3 N N N 0 -3.869 -1.325 0.13
28 H4 H H4 N N N 0 -3.881 -0.409 2.375
29 H5 H H5 N N N 0 -3.637 1.248 1.766
30 H6 H H6 N N N 0 -6.148 -0.431 1.783
31 H7 H H7 N N N 0 -5.955 1.33 2.03
32 H8 H H8 N N N 0 -3.719 1.541 -0.967
33 H9 H H9 N N N 0 -4.157 0.042 -1.848
34 H10 H H10 N N N 0 3.799 -2.212 0.659
35 H11 H H11 N N N 0 3.733 -2.034 -1.111
36 H12 H H12 N N N 0 6.971 0.91 2.106
37 H13 H H13 N N N 0 6.818 1.331 -2.139
38 H14 H H14 N N N 0 -1.655 -3.101 0.914
39 H15 H H15 N N N 0 -2.576 -2.74 -0.566
40 H16 H H16 N N N 0 -0.848 -3.154 -0.672
41 H17 H H17 N N N 0 5.076 -0.659 2.017
42 H18 H H18 N N N 0 4.93 -0.247 -2.225