Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : LD3

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 27


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C7 C C1 N N N 0 -4.991 6.149 12.796
2 B10 B B1 N N N 0 -3.87 6.357 14.112
3 B6 B B2 N N N 0 -3.529 7.027 12.496
4 B11 B B3 N N N 0 -3.016 4.794 14.238
5 B5 B B4 N N N 0 -2.245 6.162 13.391
6 B9 B B5 N N N 0 -4.758 4.834 13.871
7 B8 B B6 N N N 0 -4.962 4.576 12.104
8 B3 B B7 N N N 0 -4.21 5.932 11.263
9 B12 B B8 N N N 0 -2.151 4.513 12.694
10 B2 B B9 N N N 0 -3.36 4.38 11.381
11 B4 B B10 N N N 0 -2.453 5.901 11.617
12 C1 C C2 N N N 0 -3.708 3.801 12.985
13 C18 C C3 N N N 0 -3.709 2.281 13.114
14 C27 C C4 N N N 0 -4.839 1.723 13.998
15 C28 C C5 N N N 0 -4.509 1.993 15.41
16 S31 S S1 N N N 0 -5.542 1.012 16.481
17 O34 O O1 N N N 0 -5.021 1.353 17.803
18 O35 O O2 N N N 0 -6.921 1.348 16.237
19 N36 N N1 N N N 0 -5.268 -0.478 16.116
20 H1 H H1 N N N 0 -3.813 1.849 12.108
21 H2 H H2 N N N 0 -2.747 1.971 13.548
22 H3 H H3 N N N 0 -5.789 2.214 13.739
23 H4 H H4 N N N 0 -4.932 0.638 13.84
24 H5 H H5 N N N 0 -3.454 1.74 15.591
25 H6 H H6 N N N 0 -4.673 3.059 15.624
26 H7 H H7 N N N 0 -5.828 -1.072 16.694
27 H8 H H8 N N N 0 -5.499 -0.634 15.156