Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : L7D

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 48


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C13 C C1 N Y N 0 3.16 -2.986 1.201
2 C18 C C2 N N N 0 3.813 3.512 0.612
3 C17 C C3 N N N 0 2.705 3.034 -0.359
4 C16 C C4 N Y N 0 1.825 -1.841 -0.934
5 C15 C C5 N Y N 0 1.444 -3.086 -0.471
6 C19 C C6 N N N 0 3.389 2.872 1.957
7 C20 C C7 N N N 0 2.843 1.485 1.56
8 C11 C C8 N Y N 0 2.872 -1.169 -0.332
9 C12 C C9 N Y N 0 3.539 -1.741 0.735
10 C1 C C10 N Y N 0 -1.175 1.705 -1.095
11 C2 C C11 N Y N 0 -1.77 0.775 -0.264
12 C3 C C12 N Y N 0 -1.013 0.107 0.68
13 C4 C C13 N Y N 0 0.339 0.37 0.794
14 C5 C C14 N Y N 0 0.934 1.301 -0.036
15 C6 C C15 N Y N 0 0.178 1.969 -0.981
16 C7 C C16 N N N 0 -3.244 0.488 -0.389
17 C8 C C17 N N N 0 2.409 1.588 0.088
18 C9 C C18 N N N 0 -3.45 -0.989 -0.731
19 C10 C C19 N N N 0 -3.939 0.805 0.937
20 F1 F F1 N N N 0 -3.007 -1.781 0.334
21 F2 F F2 N N N 0 -4.809 -1.23 -0.959
22 F3 F F3 N N N 0 -2.72 -1.306 -1.882
23 O1 O O1 N N N 0 -3.802 1.299 -1.424
24 S1 S S1 N N N 0 3.356 0.418 -0.924
25 C14 C C20 N Y N 0 2.112 -3.66 0.598
26 O2 O O2 N N N 0 4.741 0.5 -0.616
27 O3 O O3 N N N 0 2.903 0.443 -2.271
28 F4 F F4 N N N 0 -3.752 2.156 1.25
29 F5 F F5 N N N 0 -5.308 0.539 0.822
30 F6 F F6 N N N 0 -3.393 0.011 1.951
31 F7 F F7 N N N 0 1.741 -4.878 1.051
32 H1 H H1 N N N 0 3.685 -3.435 2.031
33 H2 H H2 N N N 0 4.789 3.14 0.298
34 H3 H H3 N N N 0 3.823 4.599 0.687
35 H4 H H4 N N N 0 1.815 3.655 -0.257
36 H5 H H5 N N N 0 3.066 3.049 -1.387
37 H6 H H6 N N N 0 1.304 -1.393 -1.768
38 H7 H H7 N N N 0 0.627 -3.611 -0.942
39 H8 H H8 N N N 0 4.249 2.769 2.619
40 H9 H H9 N N N 0 2.609 3.467 2.433
41 H10 H H10 N N N 0 3.624 0.732 1.667
42 H11 H H11 N N N 0 1.989 1.227 2.186
43 H12 H H12 N N N 0 4.357 -1.215 1.206
44 H13 H H13 N N N 0 -1.765 2.224 -1.836
45 H14 H H14 N N N 0 -1.479 -0.619 1.33
46 H15 H H15 N N N 0 0.93 -0.151 1.533
47 H16 H H16 N N N 0 0.644 2.692 -1.633
48 H17 H H17 N N N 0 -3.708 2.25 -1.273