Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : K7V

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 49


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 P1 P P1 N N N 0 -3.557 -2.394 -0.493
2 P3 P P2 N N N 0 3.487 -2.458 -0.478
3 P4 P P3 N N N 0 3.519 1.536 1.221
4 P5 P P4 N N N 0 0.013 2.476 -2.069
5 P6 P P5 N N N 0 -3.524 1.601 1.206
6 C1 C C1 R N N 0 -1.274 -1.126 0.074
7 C2 C C2 N N N 0 -0.032 -1.881 0.554
8 C3 C C3 S N N 0 1.225 -1.149 0.08
9 C4 C C4 R N N 0 1.236 0.269 0.654
10 C5 C C5 N N N 0 -0.005 1.024 0.174
11 C6 C C6 S N N 0 -1.262 0.292 0.648
12 O11 O O1 N N N 0 -2.448 -1.81 0.518
13 O12 O O2 N N N 0 -0.036 -1.945 1.982
14 O13 O O3 N N N 0 2.384 -1.854 0.528
15 O14 O O4 N N N 0 2.41 0.953 0.21
16 O15 O O5 N N N 0 -0.001 1.088 -1.254
17 O16 O O6 N N N 0 -2.421 0.997 0.2
18 O21 O O7 N N N 0 -4.033 -1.311 -1.382
19 O23 O O8 N N N 0 4.217 -1.254 -1.259
20 O24 O O9 N N N 0 4.225 0.32 2.005
21 O25 O O10 N N N 0 -1.123 3.317 -1.632
22 O26 O O11 N N N 0 -4.615 2.437 0.368
23 O31 O O12 N N N 0 -2.908 -3.57 -1.38
24 O33 O O13 N N N 0 4.577 -3.294 0.36
25 O34 O O14 N N N 0 4.629 2.353 0.387
26 O35 O O15 N N N 0 1.395 3.251 -1.785
27 O36 O O16 N N N 0 -4.254 0.397 1.987
28 O41 O O17 N N N 0 -4.796 -2.98 0.351
29 O43 O O18 N N N 0 2.826 -3.351 -1.456
30 O44 O O19 N N N 0 2.871 2.441 2.196
31 O45 O O20 N N N 0 -0.119 2.174 -3.645
32 O46 O O21 N N N 0 -2.863 2.494 2.184
33 H1 H H1 N N N 0 -1.271 -1.078 -1.015
34 H2 H H2 N N N 0 -0.041 -2.891 0.145
35 H3 H H3 N N N 0 1.227 -1.1 -1.009
36 H4 H H4 N N N 0 1.234 0.22 1.742
37 H5 H H5 N N N 0 0.003 2.034 0.583
38 H6 H H6 N N N 0 -1.265 0.243 1.737
39 H7 H H7 N N N 0 0.724 -2.411 2.357
40 H8 H H8 N N N 0 4.673 -0.628 -0.679
41 H9 H H9 N N N 0 4.671 -0.314 1.427
42 H10 H H10 N N N 0 -5.311 2.83 0.911
43 H11 H H11 N N N 0 -2.573 -4.315 -0.862
44 H12 H H12 N N N 0 5.274 -3.688 -0.183
45 H13 H H13 N N N 0 5.33 2.733 0.933
46 H14 H H14 N N N 0 2.184 2.757 -2.048
47 H15 H H15 N N N 0 -4.71 -0.229 1.407
48 H16 H H16 N N N 0 -5.504 -3.349 -0.195
49 H17 H H17 N N N 0 -0.117 2.966 -4.199