Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : JH8

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 47


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C4 C C1 N Y N 0 -6.163 0.301 -0.021
2 C5 C C2 N Y N 0 -6.46 1.65 0.233
3 C7 C C3 N Y N 0 -4.487 -1.444 -0.305
4 C8 C C4 N Y N 0 -7.17 -0.655 -0.232
5 C10 C C5 N Y N 0 -5.49 -2.343 -0.515
6 C13 C C6 N Y N 0 -0.148 0.94 -0.683
7 C15 C C7 N Y N 0 -0.567 -0.89 0.837
8 C17 C C8 N Y N 0 1.759 -0.497 0.031
9 C21 C C9 N Y N 0 2.37 -1.558 0.728
10 C22 C C10 N N N 0 5.206 -0.121 -0.984
11 C26 C C11 N N N 0 8.416 0.643 0.957
12 C1 C C12 N Y N 0 -4.212 2.184 0.394
13 C11 C C13 N Y N 0 -2.371 0.526 0.126
14 C12 C C14 N Y N 0 -1.485 1.271 -0.654
15 C14 C C15 N Y N 0 0.319 -0.142 0.062
16 C16 C C16 N Y N 0 -1.904 -0.561 0.867
17 C18 C C17 N Y N 0 2.734 0.147 -0.675
18 C2 C C18 N Y N 0 -3.808 0.881 0.157
19 C23 C C19 N N N 0 6.188 0.093 0.14
20 C27 C C20 N N N 0 7.892 0.601 -1.526
21 C3 C C21 N Y N 0 -4.805 -0.103 -0.059
22 C9 C C22 N Y N 0 -6.826 -1.951 -0.474
23 N19 N N1 N Y N 0 3.9 -0.483 -0.428
24 N20 N N2 N Y N 0 3.646 -1.547 0.447
25 N24 N N3 N N N 0 7.462 0.436 -0.135
26 N6 N N4 N Y N 0 -5.493 2.516 0.425
27 O25 O O1 N N N 0 5.831 -0.044 1.291
28 H1 H H1 N N N 0 -7.489 1.976 0.269
29 H2 H H2 N N N 0 -3.455 -1.761 -0.339
30 H3 H H3 N N N 0 -8.21 -0.365 -0.202
31 H4 H H4 N N N 0 -5.244 -3.375 -0.717
32 H5 H H5 N N N 0 0.538 1.516 -1.286
33 H6 H H6 N N N 0 -0.205 -1.728 1.413
34 H7 H H7 N N N 0 1.872 -2.257 1.383
35 H8 H H8 N N N 0 5.112 0.797 -1.564
36 H9 H H9 N N N 0 5.562 -0.924 -1.629
37 H10 H H10 N N N 0 8.393 1.689 1.265
38 H11 H H11 N N N 0 8.146 0.009 1.801
39 H12 H H12 N N N 0 9.419 0.387 0.616
40 H13 H H13 N N N 0 -3.465 2.946 0.561
41 H14 H H14 N N N 0 -1.847 2.106 -1.235
42 H15 H H15 N N N 0 -2.59 -1.14 1.467
43 H16 H H16 N N N 0 2.596 1.005 -1.315
44 H17 H H17 N N N 0 8.259 -0.352 -1.908
45 H18 H H18 N N N 0 7.049 0.935 -2.13
46 H19 H H19 N N N 0 8.69 1.343 -1.573
47 H20 H H20 N N N 0 -7.601 -2.685 -0.636