Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : IV8

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 47


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C02 C C1 N Y N 0 -1.376 0.656 0.53
2 N03 N N1 N Y N 0 -2.119 -0.424 0.502
3 C04 C C2 N N N 0 0.107 0.684 0.795
4 C05 C C3 N N N 0 0.864 0.556 -0.529
5 C06 C C4 N Y N 0 2.347 0.584 -0.265
6 N09 N N2 N Y N 0 4.425 1.242 0.045
7 C13 C C5 N N N 0 7.809 -1.184 0.356
8 C15 C C6 N N N 0 5.688 -1.842 -0.679
9 C16 C C7 N N N 0 2.691 3.064 -0.458
10 C17 C C8 N Y N 0 -3.388 1.343 0.091
11 C19 C C9 N Y N 0 -5.749 1.456 -0.341
12 C20 C C10 N Y N 0 -4.559 2.084 -0.195
13 C21 C C11 N Y N 0 -5.801 -0.001 -0.203
14 C22 C C12 N Y N 0 -4.615 -0.703 0.079
15 C23 C C13 N Y N 0 -4.656 -2.088 0.212
16 C24 C C14 N Y N 0 -5.853 -2.754 0.065
17 C25 C C15 N Y N 0 -7.022 -2.057 -0.214
18 C26 C C16 N Y N 0 -7.005 -0.698 -0.348
19 N01 N N3 N Y N 0 -2.13 1.719 0.285
20 N07 N N4 N Y N 0 3.104 -0.457 -0.027
21 C08 C C17 N Y N 0 4.367 -0.063 0.162
22 N10 N N5 N Y N 0 3.122 1.681 -0.238
23 N11 N N6 N N N 0 5.448 -0.903 0.438
24 C12 C C18 N N N 0 6.703 -0.124 0.588
25 C14 C C19 N N N 0 7.208 -2.071 -0.758
26 N18 N N7 N Y N 0 -3.431 -0.012 0.225
27 H27 H H1 N N N 0 0.373 1.626 1.275
28 H28 H H2 N N N 0 0.376 -0.145 1.449
29 H30 H H3 N N N 0 0.598 -0.386 -1.009
30 H29 H H4 N N N 0 0.595 1.385 -1.183
31 H33 H H5 N N N 0 8.731 -0.712 0.018
32 H34 H H6 N N N 0 7.984 -1.767 1.261
33 H38 H H7 N N N 0 5.179 -2.787 -0.486
34 H37 H H8 N N N 0 5.325 -1.41 -1.612
35 H39 H H9 N N N 0 2.402 3.511 0.494
36 H40 H H10 N N N 0 3.51 3.635 -0.894
37 H41 H H11 N N N 0 1.838 3.076 -1.137
38 H42 H H12 N N N 0 -6.644 2.019 -0.559
39 H43 H H13 N N N 0 -4.503 3.158 -0.297
40 H44 H H14 N N N 0 -3.753 -2.639 0.428
41 H45 H H15 N N N 0 -5.883 -3.828 0.167
42 H46 H H16 N N N 0 -7.951 -2.595 -0.327
43 H47 H H17 N N N 0 -7.918 -0.164 -0.566
44 H31 H H18 N N N 0 6.777 0.296 1.591
45 H32 H H19 N N N 0 6.76 0.663 -0.164
46 H35 H H20 N N N 0 7.587 -1.763 -1.733
47 H36 H H21 N N N 0 7.443 -3.12 -0.575