Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : IDS

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 27


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C1 C C1 R N N 0 0.903 -1.234 -0.163
2 C2 C C2 R N N 0 0.687 0.0 0.713
3 C3 C C3 S N N 0 0.869 1.258 -0.14
4 C4 C C4 S N N 0 -0.05 1.158 -1.362
5 C5 C C5 R N N 0 0.22 -0.163 -2.083
6 C6 C C6 N N N 0 -0.656 -0.256 -3.305
7 O1 O O1 N N Y 0 2.215 -1.193 -0.727
8 O2 O O2 N N N 0 -0.634 -0.021 1.256
9 O3 O O3 N N N 0 2.228 1.358 -0.57
10 O4 O O4 N N N 0 -1.415 1.202 -0.94
11 O5 O O5 N N N 0 -0.063 -1.256 -1.211
12 O6A O O61 N N N 0 -1.444 -1.165 -3.415
13 O6B O O62 N N N 0 -0.563 0.672 -4.27
14 S S S N N N 0 -0.487 -0.148 2.766
15 O1S O O1S N N N 0 -1.81 -0.237 3.276
16 O2S O O2S N N N 0 0.541 -1.106 2.974
17 O3S O O3S N N N 0 0.067 1.171 3.282
18 H1 H H1 N N N 0 0.798 -2.133 0.444
19 H2 H H2 N N N 0 1.415 0.002 1.525
20 H3 H H3 N N N 0 0.605 2.139 0.444
21 H4 H H4 N N N 0 0.149 1.99 -2.038
22 H5 H H5 N N N 0 1.267 -0.203 -2.385
23 HO1 H HO1 N N Y 0 2.311 -1.988 -1.269
24 HO3 H HO3 N N Y 0 2.292 2.156 -1.113
25 HO4 H HO4 N N Y 0 -1.956 1.129 -1.738
26 HO6B H HO6 N N N 0 -1.126 0.613 -5.053
27 HOS3 H HOS3 N N N 0 0.156 1.081 4.241