Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : H4P

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 40


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 OA4 O OA4 N N N 0 1.596 -0.678 -1.863
2 CA4 C CA4 R N N 0 0.19 -0.604 -2.112
3 CA5 C CA5 N N N 0 -0.053 0.113 -3.441
4 OP4 O OP4 N N N 0 0.58 -0.609 -4.498
5 PA P PA N N N 0 0.283 0.198 -5.858
6 OP1 O OP1 N N N 0 0.838 1.566 -5.751
7 OP2 O OP2 N N N 0 0.973 -0.564 -7.097
8 OP3 O OP3 N N N 0 -1.306 0.281 -6.097
9 CA3 C CA3 R N N 0 -0.488 0.169 -0.981
10 OA3 O OA3 N N N 0 -1.893 0.243 -1.231
11 CA2 C CA2 R N N 0 -0.243 -0.549 0.346
12 OA2 O OA2 N N N 0 -0.785 -1.869 0.281
13 CA1 C CA1 R N N 0 -0.923 0.225 1.478
14 OA1 O OA1 N N N 0 -0.381 1.545 1.544
15 C3 C C3 N N N 0 -0.678 -0.493 2.806
16 N N N N N N 0 -1.33 0.249 3.892
17 C4 C C4 N N N 0 -1.058 -0.489 5.132
18 P P P N N N 0 0.488 0.123 5.878
19 O1P O O1P N N N 0 0.351 1.565 6.183
20 O2P O O2P N N N 0 0.786 -0.686 7.237
21 O3P O O3P N N N 0 1.704 -0.093 4.846
22 HA4 H HA4 N N N 0 1.921 0.231 -1.826
23 H1 H H1 N N N 0 -0.222 -1.612 -2.163
24 HA51 H 1HA5 N N N 0 0.359 1.121 -3.391
25 HA52 H 2HA5 N N N 0 -1.125 0.169 -3.632
26 HP2 H HP2 N N N 0 0.772 -0.049 -7.89
27 HP3 H HP3 N N N 0 -1.627 -0.628 -6.161
28 HA3 H HA3 N N N 0 -0.075 1.176 -0.931
29 H2 H H2 N N N 0 -2.218 -0.666 -1.268
30 HA2 H HA2 N N N 0 0.828 -0.605 0.537
31 H3 H H3 N N N 0 -1.732 -1.775 0.111
32 HA1 H HA1 N N N 0 -1.994 0.281 1.287
33 H4 H H4 N N N 0 0.566 1.451 1.713
34 H31 H 1H3 N N N 0 -1.091 -1.5 2.756
35 H32 H 2H3 N N N 0 0.393 -0.549 2.997
36 HN H HN N N N 0 -0.848 1.133 3.969
37 H41 H 1H4 N N N 0 -1.881 -0.341 5.831
38 H42 H 2H4 N N N 0 -0.957 -1.55 4.908
39 H2P H H2P N N N 0 1.61 -0.332 7.598
40 H3P H H3P N N N 0 1.759 -1.043 4.674