Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : GOT

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 125


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C10 C C1 N N N 0 -7.544 0.764 -0.709
2 C11 C C2 N N N 0 -8.835 1.174 -1.42
3 C12 C C3 N N N 0 -9.762 1.878 -0.427
4 C01 C C4 R N N 0 1.148 -3.709 -2.201
5 C02 C C5 N N N 0 -0.169 -3.267 -2.843
6 C04 C C6 N N N 0 -2.194 -2.159 -2.251
7 C06 C C7 N N N 0 -3.107 -1.466 -1.273
8 C07 C C8 N N N 0 -4.398 -1.055 -1.984
9 C08 C C9 N N N 0 -5.325 -0.351 -0.991
10 C09 C C10 N N N 0 -6.616 0.06 -1.702
11 C13 C C11 N N N 0 -11.053 2.289 -1.138
12 C14 C C12 N N N 0 -11.98 2.993 -0.145
13 C15 C C13 N N N 0 -13.271 3.404 -0.856
14 C16 C C14 N N N 0 -14.198 4.107 0.137
15 C17 C C15 N N N 0 -15.489 4.518 -0.574
16 C18 C C16 N N N 0 -16.417 5.222 0.419
17 C19 C C17 N N N 0 -17.708 5.633 -0.292
18 C20 C C18 N N N 0 -18.635 6.337 0.701
19 C21 C C19 N N N 0 0.853 -4.582 -0.98
20 C27 C C20 N N N 0 -1.867 -3.589 3.434
21 C28 C C21 R N N 0 -2.611 -2.336 3.899
22 C30 C C22 N N N 0 -3.257 -2.603 5.261
23 C33 C C23 N N N 0 3.24 -2.643 -1.793
24 C35 C C24 N N N 0 4.088 -1.469 -1.377
25 C36 C C25 N N N 0 5.567 -1.849 -1.472
26 C37 C C26 N N N 0 6.429 -0.658 -1.049
27 C38 C C27 N N N 0 7.908 -1.038 -1.145
28 C39 C C28 N N N 0 8.769 0.154 -0.722
29 C40 C C29 N N N 0 10.248 -0.227 -0.817
30 C41 C C30 N N N 0 11.109 0.965 -0.395
31 C42 C C31 S N N 0 12.588 0.584 -0.49
32 C43 C C32 N N N 0 13.399 0.57 0.807
33 C44 C C33 R N N 0 13.619 1.682 -0.22
34 C45 C C34 N N N 0 13.092 3.077 0.125
35 C46 C C35 N N N 0 14.265 4.052 0.235
36 C47 C C36 N N N 0 13.738 5.447 0.58
37 C48 C C37 N N N 0 14.912 6.423 0.69
38 C49 C C38 N N N 0 14.385 7.817 1.035
39 C50 C C39 N N N 0 15.558 8.793 1.145
40 O03 O O1 N N N 0 -0.996 -2.61 -1.847
41 O05 O O2 N N N 0 -2.54 -2.309 -3.399
42 O22 O O3 N N N 0 -0.008 -3.875 -0.085
43 O24 O O4 N N N 0 0.636 -4.921 2.119
44 O25 O O5 N N N 0 -1.469 -5.766 1.012
45 O26 O O6 N N N 0 -1.363 -3.38 2.113
46 O29 O O7 N N N 0 -1.689 -1.25 4.014
47 O31 O O8 N N N 0 -4.047 -1.475 5.642
48 O32 O O9 N N N 0 1.902 -2.539 -1.788
49 O34 O O10 N N N 0 3.764 -3.677 -2.131
50 P23 P P1 N N N 0 -0.525 -4.495 1.308
51 H102 H H1 N N N 0 -7.048 1.651 -0.315
52 H101 H H2 N N N 0 -7.78 0.085 0.111
53 H111 H H3 N N N 0 -8.598 1.853 -2.24
54 H112 H H4 N N N 0 -9.33 0.287 -1.814
55 H121 H H5 N N N 0 -9.999 1.2 0.392
56 H122 H H6 N N N 0 -9.266 2.765 -0.033
57 H011 H H7 N N N 0 1.731 -4.28 -2.924
58 H022 H H8 N N N 0 0.039 -2.574 -3.658
59 H021 H H9 N N N 0 -0.694 -4.139 -3.232
60 H061 H H10 N N N 0 -3.344 -2.144 -0.453
61 H062 H H11 N N N 0 -2.611 -0.579 -0.879
62 H072 H H12 N N N 0 -4.161 -0.376 -2.804
63 H071 H H13 N N N 0 -4.894 -1.942 -2.378
64 H082 H H14 N N N 0 -5.562 -1.03 -0.171
65 H081 H H15 N N N 0 -4.83 0.536 -0.597
66 H091 H H16 N N N 0 -7.112 -0.827 -2.096
67 H092 H H17 N N N 0 -6.38 0.738 -2.522
68 H132 H H18 N N N 0 -10.816 2.967 -1.958
69 H131 H H19 N N N 0 -11.549 1.402 -1.532
70 H141 H H20 N N N 0 -12.217 2.314 0.674
71 H142 H H21 N N N 0 -11.484 3.88 0.249
72 H152 H H22 N N N 0 -13.034 4.082 -1.676
73 H151 H H23 N N N 0 -13.767 2.517 -1.25
74 H162 H H24 N N N 0 -14.435 3.429 0.956
75 H161 H H25 N N N 0 -13.703 4.994 0.531
76 H172 H H26 N N N 0 -15.253 5.197 -1.394
77 H171 H H27 N N N 0 -15.985 3.631 -0.969
78 H181 H H28 N N N 0 -16.653 4.544 1.238
79 H182 H H29 N N N 0 -15.921 6.109 0.813
80 H192 H H30 N N N 0 -17.471 6.311 -1.112
81 H191 H H31 N N N 0 -18.203 4.746 -0.687
82 H203 H H32 N N N 0 -18.872 5.658 1.52
83 H202 H H33 N N N 0 -18.139 7.224 1.095
84 H201 H H34 N N N 0 -19.555 6.629 0.194
85 H212 H H35 N N N 0 0.365 -5.503 -1.301
86 H211 H H36 N N N 0 1.786 -4.824 -0.472
87 H272 H H37 N N N 0 -1.038 -3.792 4.111
88 H271 H H38 N N N 0 -2.551 -4.438 3.431
89 H281 H H39 N N N 0 -3.384 -2.082 3.174
90 H302 H H40 N N N 0 -3.892 -3.486 5.194
91 H301 H H41 N N N 0 -2.479 -2.77 6.005
92 H352 H H42 N N N 0 3.888 -0.624 -2.035
93 H351 H H43 N N N 0 3.849 -1.194 -0.349
94 H362 H H44 N N N 0 5.768 -2.695 -0.814
95 H361 H H45 N N N 0 5.806 -2.124 -2.5
96 H372 H H46 N N N 0 6.228 0.188 -1.707
97 H371 H H47 N N N 0 6.19 -0.383 -0.022
98 H382 H H48 N N N 0 8.109 -1.883 -0.487
99 H381 H H49 N N N 0 8.146 -1.313 -2.172
100 H392 H H50 N N N 0 8.568 0.999 -1.38
101 H391 H H51 N N N 0 8.53 0.428 0.305
102 H402 H H52 N N N 0 10.449 -1.072 -0.159
103 H401 H H53 N N N 0 10.487 -0.502 -1.845
104 H412 H H54 N N N 0 10.908 1.81 -1.053
105 H411 H H55 N N N 0 10.871 1.239 0.633
106 H421 H H56 N N N 0 12.834 -0.162 -1.246
107 H431 H H57 N N N 0 12.879 0.831 1.729
108 H432 H H58 N N N 0 14.178 -0.186 0.905
109 H441 H H59 N N N 0 14.543 1.658 -0.798
110 H451 H H60 N N N 0 12.413 3.412 -0.659
111 H452 H H61 N N N 0 12.56 3.039 1.075
112 H461 H H62 N N N 0 14.945 3.717 1.018
113 H462 H H63 N N N 0 14.797 4.09 -0.716
114 H471 H H64 N N N 0 13.059 5.782 -0.204
115 H472 H H65 N N N 0 13.207 5.409 1.53
116 H481 H H66 N N N 0 15.591 6.087 1.473
117 H482 H H67 N N N 0 15.444 6.46 -0.261
118 H491 H H68 N N N 0 13.705 8.153 0.251
119 H492 H H69 N N N 0 13.853 7.78 1.985
120 H503 H H70 N N N 0 16.237 8.457 1.928
121 H501 H H71 N N N 0 16.09 8.83 0.194
122 H502 H H72 N N N 0 15.182 9.786 1.39
123 H1 H H73 N N N 0 -2.252 -5.559 0.483
124 H291 H H74 N N N 0 -0.973 -1.407 4.644
125 H311 H H75 N N N 0 -4.488 -1.574 6.497