Chemical Components in the PDB

pdbe.org/chem
wwPDB
EMDataBank
spacer

PDBeChem : Atoms of Molecule

 Molecule : GLE

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 58


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C1 C C1 N N N 0 1.358 -0.11 -0.805
2 O1 O O1 N N N 0 0.444 0.098 0.272
3 C2 C C2 S N N 0 0.631 0.087 -2.137
4 O2 O O2 N N N 0 -0.444 -0.848 -2.236
5 C3 C C3 N N N 0 1.61 -0.135 -3.291
6 O3 O O3 N N N 0 0.931 0.049 -4.535
7 C31 C C31 N N N 0 1.893 -0.171 -5.568
8 C32 C C32 N N N 0 1.227 0.012 -6.933
9 F31 F F31 N N N 0 2.168 -0.204 -7.944
10 F32 F F32 N N N 0 0.178 -0.904 -7.068
11 F33 F F33 N N N 0 0.724 1.313 -7.035
12 P2 P P2 S N N 0 -1.797 0.011 -2.382
13 O21 O O21 N N N 0 -1.962 0.877 -1.193
14 O22 O O22 N N N 0 -1.712 0.926 -3.704
15 C2P C C2P N N N 0 -4.22 -0.166 -2.626
16 O23 O O23 N N N 0 -3.056 -0.984 -2.5
17 C11 C C11 N N N 0 1.178 -0.1 1.481
18 C12 C C12 N N N 0 0.252 0.109 2.681
19 C13 C C13 N N N 0 1.039 -0.103 3.976
20 C14 C C14 N N N 0 0.113 0.106 5.175
21 C15 C C15 N N N 0 0.9 -0.105 6.47
22 C16 C C16 N N N 0 -0.025 0.104 7.67
23 C17 C C17 N N N 0 0.761 -0.108 8.965
24 C18 C C18 N N N 0 -0.164 0.101 10.165
25 C19 C C19 N N N 0 0.622 -0.111 11.459
26 C20 C C20 N N N 0 -0.303 0.098 12.659
27 H11 H 1H1 N N N 0 2.178 0.603 -0.73
28 H12 H 2H1 N N N 0 1.753 -1.125 -0.755
29 H2 H H2 N N N 0 0.235 1.102 -2.187
30 H31 H 1H3 N N N 0 2.43 0.578 -3.215
31 H32 H 2H3 N N N 0 2.005 -1.15 -3.241
32 H311 H 1H31 N N N 0 2.709 0.542 -5.463
33 H312 H 2H31 N N N 0 2.285 -1.185 -5.488
34 H2P3 H 3H2P N N N 0 -4.133 0.454 -3.518
35 HO2 H HO2 N N N 0 -1.605 0.325 -4.454
36 H2P1 H 1H2P N N N 0 -5.103 -0.8 -2.709
37 H2P2 H 2H2P N N N 0 -4.313 0.472 -1.747
38 H111 H 1H11 N N N 0 2.001 0.613 1.528
39 H112 H 2H11 N N N 0 1.576 -1.114 1.502
40 H121 H 1H12 N N N 0 -0.569 -0.604 2.634
41 H122 H 2H12 N N N 0 -0.144 1.124 2.66
42 H131 H 1H13 N N N 0 1.862 0.61 4.022
43 H132 H 2H13 N N N 0 1.437 -1.117 3.997
44 H141 H 1H14 N N N 0 -0.708 -0.606 5.129
45 H142 H 2H14 N N N 0 -0.283 1.121 5.154
46 H151 H 1H15 N N N 0 1.723 0.608 6.517
47 H152 H 2H15 N N N 0 1.298 -1.12 6.491
48 H161 H 1H16 N N N 0 -0.847 -0.609 7.623
49 H162 H 2H16 N N N 0 -0.423 1.118 7.649
50 H171 H 1H17 N N N 0 1.584 0.605 9.011
51 H201 H 1H20 N N N 0 0.257 -0.052 13.582
52 H172 H 2H17 N N N 0 1.159 -1.123 8.986
53 H181 H 1H18 N N N 0 -0.986 -0.612 10.118
54 H182 H 2H18 N N N 0 -0.562 1.116 10.144
55 H191 H 1H19 N N N 0 1.445 0.602 11.506
56 H192 H 2H19 N N N 0 1.02 -1.125 11.481
57 H202 H 2H20 N N N 0 -0.701 1.113 12.638
58 H203 H 3H20 N N N 0 -1.125 -0.615 12.613