Chemical Components in the PDB

pdbe.org/chem
wwPDB
EMDataBank
spacer

PDBeChem : Atoms of Molecule

 Molecule : GF5

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 46


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C01 C C1 S N N 0 -5.314 2.538 0.444
2 C02 C C2 N N N 0 -4.448 1.459 -0.209
3 C03 C C3 N N N 0 -3.149 1.299 0.584
4 C04 C C4 N N N 0 -2.296 0.236 -0.059
5 C05 C C5 R N N 0 -0.267 -1.11 -0.155
6 C06 C C6 N N N 0 1.202 -0.865 0.194
7 C07 C C7 N N N 0 3.445 0.872 0.083
8 C08 C C8 N N N 0 4.025 2.214 -0.368
9 C09 C C9 N N N 0 -0.685 -2.466 0.354
10 C10 C C10 N N N 0 -0.462 -4.892 0.408
11 C11 C C11 N N N 0 0.391 -5.955 -0.235
12 C12 C C12 N N N 0 -6.536 2.782 -0.403
13 N01 N N1 N N N 0 -5.727 2.091 1.781
14 N02 N N2 N N N 0 -1.097 -0.077 0.47
15 N03 N N3 N N N 0 -0.056 -3.574 -0.087
16 O01 O O1 N N N 0 -2.688 -0.337 -1.054
17 O02 O O2 N N N 0 5.868 2.603 1.521
18 O03 O O3 N N N 0 6.519 1.27 -0.458
19 O04 O O4 N N N 0 -1.586 -2.56 1.159
20 O05 O O5 N N N 0 0.197 -7.247 0.07
21 O06 O O6 N N N 0 1.25 -5.643 -1.026
22 O07 O O7 N N N 0 -7.592 2.279 -0.1
23 O08 O O8 N N N 0 -6.451 3.558 -1.495
24 S01 S S1 N N N 0 1.705 0.767 -0.418
25 S02 S S2 N N N 0 5.766 2.32 0.133
26 H1 H H1 N N N 0 -4.741 3.461 0.531
27 H2 H H2 N N N 0 -4.989 0.512 -0.214
28 H3 H H3 N N N 0 -4.215 1.75 -1.233
29 H4 H H4 N N N 0 -2.608 2.245 0.59
30 H5 H H5 N N N 0 -3.382 1.007 1.608
31 H7 H H7 N N N 0 -0.395 -1.073 -1.237
32 H8 H H8 N N N 0 1.33 -0.902 1.276
33 H9 H H9 N N N 0 1.819 -1.634 -0.271
34 H10 H H10 N N N 0 4.006 0.06 -0.38
35 H11 H H11 N N N 0 3.517 0.791 1.167
36 H12 H H12 N N N 0 3.954 2.295 -1.453
37 H13 H H13 N N N 0 3.464 3.026 0.094
38 H15 H H15 N N N 0 -1.509 -5.067 0.159
39 H16 H H16 N N N 0 -0.335 -4.929 1.49
40 H17 H H17 N N N 0 -6.26 1.236 1.728
41 H18 H H18 N N N 0 -4.929 1.982 2.389
42 H20 H H20 N N N 0 -0.783 0.381 1.266
43 H22 H H22 N N N 0 0.665 -3.499 -0.731
44 H28 H H28 N N N 0 0.769 -7.892 -0.368
45 H31 H H31 N N N 0 -7.261 3.686 -2.007
46 F1 F F1 N N N 0 6.31 3.653 -0.586