Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : GC1

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 22


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 O4 O O4 N N N 0 0.911 -1.974 -3.027
2 C1 C C1 N N N 0 3.861 0.585 -1.707
3 C2 C C2 N N N 0 4.358 -0.609 -2.508
4 C3 C C3 N N N 0 3.197 -1.298 -3.222
5 C4 C C4 N N N 0 2.045 -1.583 -2.255
6 C5 C C5 N N N 0 1.706 -0.344 -1.429
7 C6 C C6 N N N 0 0.808 -0.688 -0.286
8 O2 O O2 N N N 0 5.312 -0.153 -3.461
9 O3 O O3 N N N 0 3.67 -2.53 -3.767
10 O5 O O5 N N N 0 2.859 0.185 -0.779
11 O6B O O6A N N N 0 -0.384 -1.152 -0.736
12 O6A O O6B N N N 0 1.099 -0.572 0.895
13 H1A H H1 N N N 0 4.69 1.03 -1.146
14 H2 H H2 N N N 0 4.864 -1.324 -1.85
15 H3 H H3 N N N 0 2.853 -0.699 -4.074
16 H4 H H4 N N N 0 2.304 -2.43 -1.608
17 H5 H H5 N N N 0 1.207 0.432 -2.022
18 H1 H H11 N N N 0 3.472 1.377 -2.36
19 HO4 H HO4 N N Y 0 1.228 -2.108 -3.932
20 HO2 H HO2 N N Y 0 5.772 -0.941 -3.792
21 HO3 H HO3 N N Y 0 4.445 -2.781 -3.243
22 HO6B H HO6A N N N 0 -0.988 -1.385 0.001