Chemical Components in the PDB

pdbe.org/chem
wwPDB
EMDataBank
spacer

PDBeChem : Atoms of Molecule

 Molecule : G2E

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 47


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C10 C C1 N N N 0 0.738 0.399 -1.375
2 C13 C C2 N N N 0 3.167 0.209 -0.899
3 C15 C C3 N Y N 0 -0.37 2.857 1.235
4 C17 C C4 N Y N 0 2.332 2.265 1.308
5 C20 C C5 N Y N 0 -3.868 -1.185 -0.005
6 C21 C C6 N Y N 0 0.445 3.454 2.181
7 C22 C C7 N N N 0 4.775 -1.616 -0.327
8 C24 C C8 N N N 0 4.979 -2.887 0.5
9 C26 C C9 N N N 0 6.382 -3.441 0.245
10 C06 C C10 R N N 0 -0.418 1.163 -0.796
11 C07 C C11 N Y N 0 0.162 1.968 0.329
12 C08 C C12 N Y N 0 -1.53 0.257 -0.339
13 C09 C C13 N N N 0 -1.098 2.053 -1.846
14 C11 C C14 N Y N 0 1.52 1.659 0.353
15 C12 C C15 N Y N 0 -2.55 0.377 -1.279
16 C14 C C16 N Y N 0 -1.671 -0.578 0.749
17 C16 C C17 N N N 0 3.372 -1.062 -0.072
18 C18 C C18 N Y N 0 -3.723 -0.35 -1.098
19 C19 C C19 N Y N 0 -2.837 -1.303 0.924
20 C23 C C20 N Y N 0 1.794 3.155 2.213
21 C25 C C21 N N N 0 -4.333 -2.908 1.337
22 N05 N N1 N N N 0 1.824 0.74 -0.654
23 O01 O O1 N N N 0 -2.202 1.236 -2.279
24 O02 O O2 N N N 0 0.7 -0.378 -2.306
25 O03 O O3 N N N 0 -3.222 -2.182 1.895
26 O04 O O4 N N N 0 -4.901 -1.987 0.388
27 H1 H H1 N N N 0 3.91 0.953 -0.611
28 H2 H H2 N N N 0 3.279 -0.024 -1.957
29 H3 H H3 N N N 0 -1.425 3.089 1.208
30 H4 H H4 N N N 0 3.387 2.036 1.34
31 H5 H H5 N N N 0 0.028 4.152 2.892
32 H6 H H6 N N N 0 5.517 -0.872 -0.039
33 H7 H H7 N N N 0 4.886 -1.85 -1.386
34 H8 H H8 N N N 0 4.868 -2.654 1.559
35 H9 H H9 N N N 0 4.236 -3.631 0.212
36 H10 H H10 N N N 0 6.528 -4.347 0.834
37 H11 H H11 N N N 0 6.494 -3.675 -0.814
38 H12 H H12 N N N 0 7.125 -2.697 0.533
39 H13 H H13 N N N 0 -1.454 2.979 -1.396
40 H14 H H14 N N N 0 -0.42 2.262 -2.674
41 H15 H H15 N N N 0 -0.868 -0.667 1.467
42 H16 H H16 N N N 0 3.26 -0.828 0.987
43 H17 H H17 N N N 0 2.629 -1.806 -0.36
44 H18 H H18 N N N 0 -4.524 -0.262 -1.817
45 H19 H H19 N N N 0 2.43 3.622 2.951
46 H20 H H20 N N N 0 -3.988 -3.812 0.835
47 H21 H H21 N N N 0 -5.059 -3.155 2.112