Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : FP8

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 82


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C14 C C1 N N N 0 4.883 -1.639 2.152
2 C13 C C2 S N N 0 5.993 -0.641 2.404
3 C12 C C3 N N N 0 6.579 -0.148 1.079
4 C11 C C4 S N N 0 5.525 0.666 0.326
5 C16 C C5 N N N 0 6.742 -2.891 2.761
6 C17 C C6 N N N 0 7.05 -1.442 3.199
7 C19 C C7 R N N 0 6.164 1.314 -0.904
8 C23 C C8 N N N 0 -2.753 -0.389 -0.564
9 C24 C C9 N N N 0 -3.872 0.541 -0.06
10 C25 C C10 N N N 0 -4.809 -0.224 -0.993
11 C26 C C11 N N N 0 -6.037 0.446 -1.61
12 C28 C C12 N N N 0 -8.012 -0.09 0.002
13 C02 C C13 N N N 0 -0.367 -0.428 -0.625
14 C04 C C14 S N N 0 2.06 -0.64 -0.639
15 C05 C C15 N N N 0 2.375 -1.405 -1.926
16 C06 C C16 N N N 0 1.272 -2.431 -2.192
17 C07 C C17 N N N 0 1.521 -3.109 -3.541
18 C08 C C18 N N N 0 1.279 -3.485 -1.083
19 C09 C C19 N N N 0 3.204 0.284 -0.311
20 C37 C C20 N N N 0 -5.753 -1.303 -0.461
21 C38 C C21 N N N 0 -3.59 -0.584 -1.841
22 N03 N N1 N N N 0 0.836 0.145 -0.824
23 N10 N N2 N N N 0 4.437 -0.218 -0.098
24 N15 N N3 N N N 0 5.329 -2.889 2.365
25 N27 N N4 N N N 0 -6.814 -0.281 -0.585
26 O01 O O1 N N N 0 -0.438 -1.594 -0.293
27 O18 O O2 N N N 0 3.755 -1.352 1.814
28 O20 O O3 N N N 0 6.814 0.311 -1.687
29 O21 O O4 N N N 0 3.016 1.48 -0.239
30 O22 O O5 N N N 0 -1.492 0.293 -0.795
31 SG S S1 N N Y 0 7.381 2.549 -0.372
32 H1 H H1 N N N 0 5.624 0.198 2.993
33 H2 H H2 N N N 0 7.449 0.479 1.278
34 H3 H H3 N N N 0 6.879 -1.003 0.474
35 H4 H H4 N N N 0 5.129 1.441 0.981
36 H5 H H5 N N N 0 7.37 -3.171 1.915
37 H6 H H6 N N N 0 6.901 -3.578 3.592
38 H7 H H7 N N N 0 8.059 -1.152 2.907
39 H8 H H8 N N N 0 6.905 -1.32 4.272
40 H9 H H9 N N N 0 5.392 1.799 -1.501
41 H10 H H10 N N N 0 -2.641 -1.297 0.027
42 H11 H H11 N N N 0 -4.105 0.412 0.997
43 H12 H H12 N N N 0 -3.732 1.586 -0.338
44 H13 H H13 N N N 0 -6.055 1.529 -1.49
45 H14 H H14 N N N 0 -6.246 0.128 -2.632
46 H18 H H18 N N N 0 1.918 -1.347 0.178
47 H19 H H19 N N N 0 2.429 -0.705 -2.76
48 H20 H H20 N N N 0 3.331 -1.918 -1.819
49 H21 H H21 N N N 0 0.305 -1.929 -2.211
50 H22 H H22 N N N 0 2.488 -3.611 -3.523
51 H23 H H23 N N N 0 0.735 -3.841 -3.73
52 H24 H H24 N N N 0 1.516 -2.358 -4.331
53 H25 H H25 N N N 0 2.246 -3.988 -1.065
54 H26 H H26 N N N 0 1.102 -3.003 -0.122
55 H27 H H27 N N N 0 0.493 -4.217 -1.273
56 H28 H H28 N N N 0 -5.878 -2.151 -1.134
57 H29 H H29 N N N 0 -5.547 -1.6 0.568
58 H30 H H30 N N N 0 -3.372 0.142 -2.624
59 H31 H H31 N N N 0 -3.599 -1.612 -2.206
60 H32 H H32 N N N 0 0.893 1.076 -1.089
61 H33 H H33 N N N 0 4.603 -1.166 -0.225
62 H34 H H34 N N N 0 4.786 -3.687 2.269
63 H36 H H36 N N N 0 6.222 -0.384 -2.006
64 O1 O O6 N N Y 0 7.723 3.409 -1.451
65 O2 O O7 N N Y 0 6.617 3.445 0.593
66 O3 O O8 N N Y 0 8.387 1.946 0.431
67 H35 H H35 N N Y 0 7.147 4.163 0.966
68 C1 C C22 N N N 0 -8.857 1.098 -0.38
69 C2 C C23 N Y N 0 -10.137 1.081 0.415
70 C3 C C24 N Y N 0 -10.2 1.722 1.638
71 C4 C C25 N Y N 0 -11.374 1.706 2.367
72 C5 C C26 N Y N 0 -12.485 1.049 1.873
73 C6 C C27 N Y N 0 -12.423 0.409 0.65
74 C7 C C28 N Y N 0 -11.25 0.428 -0.082
75 H17 H H17 N N N 0 -8.31 2.017 -0.168
76 H37 H H37 N N N 0 -9.089 1.052 -1.444
77 H38 H H38 N N N 0 -9.331 2.235 2.024
78 H39 H H39 N N N 0 -11.422 2.206 3.323
79 H40 H H40 N N N 0 -13.403 1.036 2.444
80 H41 H H41 N N N 0 -13.291 -0.105 0.264
81 H42 H H42 N N N 0 -11.201 -0.072 -1.037
82 O4 O O9 N N N 0 -8.41 -0.873 0.837