Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : F7O

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 38


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C1' C C3 N N N 0 -1.712 -1.566 1.367
2 C2 C C9 N Y N 0 4.537 -2.059 -0.76
3 C2' C C2 R N N 0 -1.702 -0.036 1.322
4 C2A C C4 N N N 0 0.433 0.537 0.298
5 C2B C C5 N N N 0 1.255 1.0 -0.877
6 C3' C C1 N N N 0 -3.135 0.479 1.177
7 C4 C C8 N Y N 0 3.553 0.003 -0.513
8 C5 C C7 N Y N 0 4.78 0.524 -0.071
9 C6 C C10 N Y N 0 5.881 -0.346 0.006
10 C8 C C6 N Y N 0 3.344 2.148 -0.051
11 H1 H H1 N N N 0 -6.221 -1.287 0.867
12 H13 H H13 N N N 0 7.87 -0.499 0.477
13 H10 H H10 N N N 0 0.925 1.993 -1.183
14 H11 H H11 N N N 0 2.915 3.131 0.076
15 H12 H H12 N N N 0 4.442 -3.099 -1.036
16 H14 H H14 N N N 0 7.227 1.038 0.691
17 H15 H H15 N N N 0 -6.456 -0.405 -2.155
18 H2 H H2 N N N 0 -3.122 1.562 1.056
19 H3 H H3 N N N 0 -3.707 0.22 2.069
20 H4 H H4 N N N 0 -1.268 0.351 2.244
21 H5 H H5 N N N 0 -0.687 -1.936 1.381
22 H6 H H6 N N N 0 -2.231 -1.9 2.266
23 H7 H H7 N N Y 0 -2.429 -3.037 0.175
24 H8 H H8 N N N 0 -1.337 0.622 -0.663
25 H9 H H9 N N N 0 1.128 0.303 -1.706
26 N1 N N5 N Y N 0 5.712 -1.615 -0.35
27 N2' N N1 N N N 0 -0.903 0.413 0.179
28 N3 N N4 N Y N 0 3.478 -1.283 -0.844
29 N6 N N6 N N N 0 7.116 0.11 0.434
30 N7 N N3 N Y N 0 4.583 1.837 0.198
31 N9 N N2 N Y N 0 2.668 1.051 -0.495
32 O1' O O4 N N N 0 -2.385 -2.072 0.213
33 O2A O O5 N N N 0 0.975 0.276 1.352
34 O3' O O3 N N N 0 -3.743 -0.121 0.031
35 OP1 O O1 N N N 0 -6.277 -0.336 0.701
36 OP3 O O6 N N Y 0 -5.561 -0.551 -1.819
37 P P P1 N N N 0 -5.255 0.193 -0.425
38 OP2 O O2 N N N 0 -5.425 1.654 -0.597