Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : DMA

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 26


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C1 C C1 N N N 0 -0.208 0.429 2.127
2 O1 O O1 N N N 0 -0.77 -0.377 1.089
3 C2 C C2 N N N 0 -0.79 0.015 3.454
4 C3 C C3 N N N 0 -0.008 -0.128 4.495
5 C4 C C4 N N N 0 -0.565 -0.667 5.787
6 C5 C C5 N N N 0 1.448 0.244 4.4
7 PA P PA R N N 0 -0.108 0.116 -0.293
8 O1A O O1A N N N 0 -0.425 1.545 -0.508
9 O2A O O2A N N N 0 1.488 -0.075 -0.221
10 O3A O O3A N N N 0 -0.7 -0.754 -1.511
11 PB P PB N N N 0 0.001 -0.21 -2.854
12 O1B O O1B N N N 0 1.467 -0.381 -2.75
13 O2B O O2B N N N 0 -0.546 -1.041 -4.12
14 O3B O O3B N N N 0 -0.344 1.35 -3.046
15 H11 H 1H1 N N N 0 -0.441 1.477 1.939
16 H12 H 2H1 N N N 0 0.872 0.294 2.146
17 H2 H H2 N N N 0 -1.851 -0.161 3.547
18 H41 H 1H4 N N N 0 0.227 -0.715 6.533
19 H42 H 2H4 N N N 0 -1.358 -0.009 6.143
20 H43 H 3H4 N N N 0 -0.968 -1.665 5.621
21 H51 H 1H5 N N N 0 1.538 1.276 4.06
22 H52 H 2H5 N N N 0 1.914 0.143 5.381
23 H53 H 3H5 N N N 0 1.947 -0.416 3.692
24 HOA2 H 2HOA N N N 0 1.65 -1.018 -0.08
25 HOB2 H 2HOB N N N 0 -0.103 -0.685 -4.902
26 HOB3 H 3HOB N N N 0 -1.307 1.417 -3.11