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PDBeChem : Atoms of Molecule
Molecule : CTP
Atoms of a chemical element, that composes a molecule
Total Number of Atoms: 45
| Record |
Atom Name |
Symbol |
PDB Name |
Stereochemistry |
Is Aromatic |
Is Leaving Atom |
Charge |
X-Coordinate |
Y-Coordinate |
Z-Coordinate |
| 1 |
N1 |
N |
N1 |
N |
N |
N |
0 |
0.558 |
0.502 |
-4.978 |
| 2 |
C2 |
C |
C2 |
N |
N |
N |
0 |
1.196 |
-0.671 |
-4.818 |
| 3 |
N3 |
N |
N3 |
N |
N |
N |
0 |
2.313 |
-0.944 |
-5.492 |
| 4 |
C4 |
C |
C4 |
N |
N |
N |
0 |
2.825 |
-0.061 |
-6.34 |
| 5 |
C5 |
C |
C5 |
N |
N |
N |
0 |
2.184 |
1.18 |
-6.526 |
| 6 |
C6 |
C |
C6 |
N |
N |
N |
0 |
1.046 |
1.44 |
-5.838 |
| 7 |
O2 |
O |
O2 |
N |
N |
N |
0 |
0.745 |
-1.498 |
-4.044 |
| 8 |
N4 |
N |
N4 |
N |
N |
N |
0 |
3.979 |
-0.354 |
-7.029 |
| 9 |
C1' |
C |
C1* |
R |
N |
N |
0 |
-0.667 |
0.774 |
-4.224 |
| 10 |
C2' |
C |
C2* |
R |
N |
N |
0 |
-1.737 |
-0.296 |
-4.533 |
| 11 |
O2' |
O |
O2* |
N |
N |
N |
0 |
-2.665 |
0.181 |
-5.509 |
| 12 |
C3' |
C |
C3* |
S |
N |
N |
0 |
-2.445 |
-0.52 |
-3.176 |
| 13 |
C4' |
C |
C4* |
R |
N |
N |
0 |
-1.721 |
0.444 |
-2.211 |
| 14 |
O4' |
O |
O4* |
N |
N |
N |
0 |
-0.421 |
0.654 |
-2.805 |
| 15 |
O3' |
O |
O3* |
N |
N |
N |
0 |
-3.831 |
-0.184 |
-3.272 |
| 16 |
C5' |
C |
C5* |
N |
N |
N |
0 |
-1.576 |
-0.192 |
-0.827 |
| 17 |
O5' |
O |
O5* |
N |
N |
N |
0 |
-0.841 |
0.686 |
0.026 |
| 18 |
PA |
P |
PA |
S |
N |
N |
0 |
-0.727 |
-0.042 |
1.457 |
| 19 |
O1A |
O |
O1A |
N |
N |
N |
0 |
-0.021 |
-1.333 |
1.298 |
| 20 |
O2A |
O |
O2A |
N |
N |
N |
0 |
-2.203 |
-0.307 |
2.043 |
| 21 |
O3A |
O |
O3A |
N |
N |
N |
0 |
0.093 |
0.896 |
2.475 |
| 22 |
PB |
P |
PB |
R |
N |
N |
0 |
0.168 |
0.109 |
3.877 |
| 23 |
O1B |
O |
O1B |
N |
N |
N |
0 |
0.86 |
-1.183 |
3.681 |
| 24 |
O2B |
O |
O2B |
N |
N |
N |
0 |
-1.323 |
-0.157 |
4.423 |
| 25 |
O3B |
O |
O3B |
N |
N |
N |
0 |
0.98 |
0.996 |
4.948 |
| 26 |
PG |
P |
PG |
N |
N |
N |
0 |
1.016 |
0.153 |
6.319 |
| 27 |
O1G |
O |
O1G |
N |
N |
N |
0 |
1.695 |
-1.14 |
6.085 |
| 28 |
O2G |
O |
O2G |
N |
N |
N |
0 |
1.817 |
0.986 |
7.44 |
| 29 |
O3G |
O |
O3G |
N |
N |
N |
0 |
-0.489 |
-0.113 |
6.824 |
| 30 |
H5 |
H |
H5 |
N |
N |
N |
0 |
2.588 |
1.908 |
-7.212 |
| 31 |
H6 |
H |
H6 |
N |
N |
N |
0 |
0.534 |
2.382 |
-5.967 |
| 32 |
HN41 |
H |
1HN4 |
N |
N |
N |
0 |
4.42 |
-1.207 |
-6.896 |
| 33 |
HN42 |
H |
2HN4 |
N |
N |
N |
0 |
4.349 |
0.291 |
-7.651 |
| 34 |
H1' |
H |
H1* |
N |
N |
N |
0 |
-1.045 |
1.768 |
-4.461 |
| 35 |
H2' |
H |
H2* |
N |
N |
N |
0 |
-1.265 |
-1.217 |
-4.874 |
| 36 |
HO2' |
H |
*HO2 |
N |
N |
N |
0 |
-3.339 |
-0.504 |
-5.613 |
| 37 |
H3' |
H |
H3* |
N |
N |
N |
0 |
-2.325 |
-1.552 |
-2.847 |
| 38 |
H4' |
H |
H4* |
N |
N |
N |
0 |
-2.262 |
1.387 |
-2.139 |
| 39 |
HO3' |
H |
*HO3 |
N |
N |
N |
0 |
-4.229 |
-0.817 |
-3.885 |
| 40 |
H5'1 |
H |
1H5* |
N |
N |
N |
0 |
-2.565 |
-0.368 |
-0.403 |
| 41 |
H5'2 |
H |
2H5* |
N |
N |
N |
0 |
-1.045 |
-1.14 |
-0.917 |
| 42 |
HOA2 |
H |
2HOA |
N |
N |
N |
0 |
-2.628 |
0.557 |
2.131 |
| 43 |
HOB2 |
H |
2HOB |
N |
N |
N |
0 |
-1.738 |
0.708 |
4.537 |
| 44 |
HOG2 |
H |
2HOG |
N |
N |
N |
0 |
1.815 |
0.447 |
8.243 |
| 45 |
HOG3 |
H |
3HOG |
N |
N |
N |
0 |
-0.895 |
0.752 |
6.964 |
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