Chemical Components in the PDB

pdbe.org/chem
wwPDB
EMDataBank
spacer

PDBeChem : Atoms of Molecule

 Molecule : C7A

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 63


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C1 C C1 N N N 0 6.625 1.327 -1.04
2 C2 C C2 N N N 0 5.865 1.681 0.24
3 C3 C C3 N N N 0 6.583 1.072 1.446
4 C4 C C4 N N N 0 5.809 3.203 0.395
5 C5 C C5 N Y N 0 4.463 1.133 0.16
6 C6 C C6 N Y N 0 4.262 -0.228 0.017
7 C7 C C7 N Y N 0 2.979 -0.733 -0.056
8 C8 C C8 N Y N 0 1.89 0.126 0.014
9 N1 N N1 N N N 0 0.589 -0.383 -0.06
10 C9 C C9 N N N 0 0.3 -1.371 -0.93
11 O1 O O1 N N N 0 -0.845 -1.546 -1.29
12 C10 C C10 N N N 0 1.4 -2.257 -1.456
13 C11 C C11 R N N 0 -0.459 0.157 0.81
14 C12 C C12 N N N 0 -1.535 0.789 -0.035
15 O2 O O2 N N N 0 -1.321 1.041 -1.202
16 N2 N N2 N N N 0 -2.736 1.076 0.507
17 C13 C C13 N N N 0 -3.782 1.69 -0.313
18 C14 C C14 N N N 0 -4.749 2.461 0.587
19 C15 C C15 N N N 0 -5.842 3.103 -0.27
20 C16 C C16 N N N 0 -6.606 2.013 -1.024
21 C17 C C17 N N N 0 -5.639 1.242 -1.924
22 C18 C C18 N N N 0 -4.546 0.6 -1.067
23 C19 C C19 N Y N 0 -1.054 -0.957 1.631
24 C20 C C20 N Y N 0 -1.991 -0.681 2.615
25 C21 C C21 N Y N 0 -2.513 -1.738 3.345
26 C22 C C22 N Y N 0 -2.084 -3.023 3.07
27 N3 N N3 N Y N 0 -1.191 -3.248 2.127
28 C23 C C23 N Y N 0 -0.678 -2.269 1.409
29 C24 C C24 N Y N 0 2.096 1.492 0.157
30 C25 C C25 N Y N 0 3.382 1.991 0.235
31 H1 H H1 N N N 0 6.114 1.761 -1.899
32 H2 H H2 N N N 0 7.639 1.723 -0.982
33 H3 H H3 N N N 0 6.665 0.243 -1.15
34 H4 H H4 N N N 0 7.597 1.469 1.503
35 H5 H H5 N N N 0 6.041 1.325 2.357
36 H6 H H6 N N N 0 6.623 -0.012 1.335
37 H7 H H7 N N N 0 5.298 3.637 -0.464
38 H8 H H8 N N N 0 5.267 3.455 1.306
39 H9 H H9 N N N 0 6.823 3.599 0.453
40 H10 H H10 N N N 0 5.109 -0.895 -0.038
41 H11 H H11 N N N 0 2.822 -1.796 -0.168
42 H12 H H12 N N N 0 2.212 -1.64 -1.84
43 H13 H H13 N N N 0 1.773 -2.889 -0.651
44 H15 H H15 N N N 0 -0.03 0.908 1.473
45 H16 H H16 N N N 0 -2.907 0.875 1.441
46 H17 H H17 N N N 0 -3.327 2.375 -1.029
47 H18 H H18 N N N 0 -5.204 1.776 1.302
48 H19 H H19 N N N 0 -4.205 3.239 1.123
49 H20 H H20 N N N 0 -6.531 3.653 0.371
50 H21 H H21 N N N 0 -5.387 3.789 -0.986
51 H22 H H22 N N N 0 -7.061 1.328 -0.308
52 H23 H H23 N N N 0 -7.385 2.47 -1.634
53 H24 H H24 N N N 0 -6.183 0.464 -2.461
54 H25 H H25 N N N 0 -5.184 1.926 -2.639
55 H26 H H26 N N N 0 -3.857 0.05 -1.708
56 H27 H H27 N N N 0 -5.001 -0.086 -0.351
57 H28 H H28 N N N 0 -2.307 0.334 2.808
58 H29 H H29 N N N 0 -3.244 -1.559 4.12
59 H31 H H31 N N N 0 0.048 -2.493 0.641
60 H30 H H30 N N N 0 -2.485 -3.851 3.635
61 H32 H H32 N N N 0 1.252 2.163 0.212
62 H33 H H33 N N N 0 3.542 3.053 0.351
63 CL1 CL CL1 N N Y 0 0.753 -3.293 -2.783