Chemical Components in the PDB

pdbe.org/chem
wwPDB
EMDataBank
spacer

PDBeChem : Atoms of Molecule

 Molecule : BPY

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 24


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 CK1 C CK1 N Y N 0 -1.737 -0.347 0.793
2 CK2 C CK2 N Y N 0 -0.459 -0.091 0.299
3 CK3 C CK3 N Y N 0 0.593 0.135 1.187
4 CK4 C CK4 N Y N 0 0.361 0.094 2.557
5 CK5 C CK5 N Y N 0 -0.914 -0.159 3.035
6 CK6 C CK6 N Y N 0 -1.958 -0.379 2.155
7 CK7 C CK7 N Y N 0 -0.22 -0.056 -1.164
8 CK8 C CK8 N Y N 0 -0.897 0.864 -1.961
9 CK9 C CK9 N Y N 0 -0.671 0.893 -3.322
10 CKA C CK10 N Y N 0 0.226 0.01 -3.895
11 CKB C CK11 N Y N 0 0.901 -0.905 -3.109
12 CKC C CK12 N Y N 0 0.687 -0.939 -1.746
13 OK1 O OK1 N N N 0 1.383 0.31 3.427
14 OK2 O OK2 N N N 0 1.843 0.385 0.714
15 HCK1 H HCK1 N N N 0 -2.555 -0.52 0.109
16 HCK5 H HCK5 N N N 0 -1.094 -0.186 4.1
17 HCK6 H HCK6 N N N 0 -2.949 -0.577 2.534
18 HCK8 H HCK8 N N N 0 -1.599 1.553 -1.515
19 HCK9 H HCK9 N N N 0 -1.196 1.605 -3.941
20 HC10 H HC10 N N N 0 0.4 0.036 -4.961
21 HC11 H HC11 N N N 0 1.6 -1.593 -3.561
22 HC12 H HC12 N N N 0 1.214 -1.655 -1.133
23 H0K1 H H0K1 N N N 0 1.777 -0.552 3.614
24 HOK2 H HOK2 N N N 0 1.914 1.343 0.605