Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : ADA

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 23


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C1 C C1 S N N 0 1.444 -0.34 -0.983
2 C2 C C2 R N N 0 0.164 -0.466 -1.813
3 C3 C C3 S N N 0 -0.882 0.509 -1.27
4 C4 C C4 R N N 0 -1.053 0.259 0.232
5 C5 C C5 S N N 0 0.317 0.33 0.908
6 C6 C C6 N N N 0 0.155 0.117 2.391
7 O1 O O1 N N Y 0 1.924 1.003 -1.052
8 O2 O O2 N N N 0 0.447 -0.154 -3.179
9 O3 O O3 N N N 0 -2.129 0.3 -1.936
10 O4 O O4 N N N 0 -1.622 -1.034 0.441
11 O5 O O5 N N N 0 1.172 -0.678 0.374
12 O6B O O6B N N N 0 -0.611 0.952 3.109
13 O6A O O6A N N N 0 0.715 -0.805 2.933
14 H1 H H1 N N N 0 2.201 -1.016 -1.381
15 H2 H H2 N N N 0 -0.216 -1.485 -1.744
16 H3 H H3 N N N 0 -0.548 1.534 -1.434
17 H4 H H4 N N N 0 -1.709 1.019 0.656
18 H5 H H5 N N N 0 0.759 1.311 0.729
19 HO1 H HA N N Y 0 2.73 1.039 -0.519
20 HO2 H HB N N Y 0 1.108 -0.791 -3.48
21 HO3 H HC N N Y 0 -1.976 0.468 -2.875
22 HO4 H HD N N Y 0 -1.705 -1.152 1.397
23 HO6B H H6B N N N 0 -0.716 0.815 4.06