Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : AC2

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 27


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C3' C C3* N N N 0 0.329 0.322 5.201
2 O3' O O3* N N N 0 -0.521 -0.814 5.362
3 C2' C C2* N N N 0 1.043 0.237 3.851
4 O1' O O1* N N N 0 0.075 0.214 2.8
5 C1' C C1* N N N 0 0.801 0.136 1.572
6 N9 N N9 N Y N 0 -0.14 0.109 0.45
7 C8 C C8 N Y N 0 -1.501 0.151 0.537
8 N7 N N7 N Y N 0 -2.021 0.109 -0.654
9 C5 C C5 N Y N 0 -1.029 0.037 -1.574
10 C6 C C6 N N N 0 -0.998 -0.03 -2.987
11 O6 O O6 N N N 0 -2.031 -0.031 -3.635
12 N1 N N1 N N N 0 0.204 -0.087 -3.6
13 C2 C C2 N N N 0 1.352 -0.091 -2.866
14 N2 N N2 N N N 0 2.559 -0.156 -3.516
15 N3 N N3 N N N 0 1.337 -0.028 -1.553
16 C4 C C4 N Y N 0 0.184 0.036 -0.877
17 H3'1 H 1H3* N N N 0 1.067 0.339 6.003
18 H3'2 H 2H3* N N N 0 -0.269 1.232 5.239
19 HO'3 H 3HO* N N N 0 -0.951 -0.722 6.223
20 H2'1 H 1H2* N N N 0 1.642 -0.672 3.813
21 H2'2 H 2H2* N N N 0 1.692 1.105 3.728
22 H1'1 H 1H1* N N N 0 1.403 -0.772 1.563
23 H1'2 H 2H1* N N N 0 1.452 1.004 1.478
24 H8 H H8 N N N 0 -2.063 0.211 1.457
25 HN1 H HN1 N N N 0 0.25 -0.135 -4.568
26 HN21 H 1HN2 N N N 0 3.385 -0.155 -3.007
27 HN22 H 2HN2 N N N 0 2.586 -0.207 -4.484