Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : AC1

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 45


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C1 C C1 S N N 0 0.592 -0.193 -4.208
2 O2 O O2 N N N 0 -1.742 -0.76 -4.48
3 C2 C C2 R N N 0 -0.645 -0.823 -3.566
4 C4A C C4 R N N 0 -0.5 -0.086 3.826
5 C3 C C3A S N N 0 -0.994 -0.05 -2.289
6 O3 O O3A N N N 0 -2.056 -0.715 -1.601
7 C4 C C4A S N N 0 0.249 0.002 -1.394
8 N4A N N4A N N N 0 -0.015 0.865 -0.235
9 O5 O O5 N N N 0 1.698 -0.278 -3.311
10 C5 C C5A R N N 0 1.419 0.571 -2.2
11 C6 C C6A N N N 0 2.656 0.661 -1.305
12 C1B C C1B S N N 0 -0.464 -0.014 0.851
13 C2B C C2B S N N 0 -1.502 0.721 1.702
14 O2B O O2B N N N 0 -1.009 2.012 2.065
15 C3B C C3B S N N 0 -1.766 -0.104 2.967
16 O3B O O3B N N N 0 -2.086 -1.45 2.611
17 O4 O O4 N N N 0 -0.325 1.218 4.38
18 C5B C C5B N N N 0 0.696 -0.436 2.991
19 C7B C C7B N N N 0 0.713 -0.4 1.697
20 C6B C C6B N N N 0 1.956 -0.855 3.702
21 O6B O O6B N N N 0 2.973 -1.144 2.741
22 O1 O O1 N N Y 0 0.326 1.179 -4.504
23 H1 H H1 N N N 0 0.832 -0.722 -5.13
24 HO2 H HO2 N N Y 0 -1.477 -1.252 -5.269
25 H2 H HC2 N N N 0 -0.437 -1.863 -3.318
26 HC4 H HC4 N N N 0 -0.601 -0.811 4.634
27 H3 H HCA3 N N N 0 -1.303 0.962 -2.548
28 HO3 H HOA3 N N Y 0 -2.81 -0.736 -2.206
29 H4 H HCA4 N N N 0 0.494 -1.002 -1.052
30 HN4 H HN4 N N N 0 0.873 1.248 0.049
31 H5 H HCA5 N N N 0 1.16 1.566 -2.561
32 H61 H H6A1 N N N 0 3.52 0.945 -1.906
33 H62 H H6A2 N N N 0 2.491 1.409 -0.53
34 H63 H H6A3 N N N 0 2.84 -0.307 -0.841
35 HCB1 H HCB1 N N N 0 -0.915 -0.911 0.427
36 HCB2 H HCB2 N N N 0 -2.427 0.828 1.135
37 HO2B H HO2B N N N 0 -1.69 2.428 2.61
38 HCB3 H HCB3 N N N 0 -2.594 0.333 3.525
39 HOB3 H HOB3 N N N 0 -2.227 -1.932 3.437
40 HO4 H HO4 N N N 0 0.474 1.187 4.922
41 HC7 H HC7 N N N 0 1.631 -0.665 1.195
42 HC61 H HC61 N N N 0 2.291 -0.048 4.354
43 HC62 H HC62 N N N 0 1.757 -1.745 4.3
44 HO6B H HO6B N N N 0 3.76 -1.408 3.236
45 HO1 H HO1 N N Y 0 1.127 1.538 -4.91