Chemical Components in the PDB

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  • BM3 (Stereoisomer)
  • LXB (Stereoisomer)
  • A1AAJ (Stereoisomer)
  • BM7 (Stereoisomer)
  • LXZ (Stereoisomer)
  • NGA (Stereoisomer)
  • HSQ (Stereoisomer)
  • NGZ (Stereoisomer)
  • NAA (Stereoisomer)
  • NDG (Stereoisomer)
  • NAG (Stereoisomer)
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PDBeChem : Atoms of Molecule

 Molecule : A2G

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 30


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 O5 O O N N N 0 -1.252 -1.038 -0.47
2 C1 C C1 S N N 0 0.092 -1.175 -0.005
3 O1 O O1 N N Y 0 0.084 -1.632 1.349
4 C2 C C2 R N N 0 0.798 0.181 -0.082
5 N2 N N2 N N N 0 2.158 0.055 0.449
6 C3 C C3 R N N 0 0.016 1.203 0.749
7 O3 O O3 N N N 0 0.627 2.489 0.624
8 C4 C C4 R N N 0 -1.425 1.268 0.234
9 O4 O O4 N N N 0 -1.428 1.73 -1.118
10 C5 C C5 R N N 0 -2.045 -0.13 0.298
11 C6 C C6 N N N 0 -3.465 -0.085 -0.271
12 O6 O O6 N N N 0 -4.085 -1.362 -0.105
13 C7 C C7 N N N 0 3.158 -0.365 -0.351
14 O7 O O7 N N N 0 2.932 -0.639 -1.511
15 C8 C C8 N N N 0 4.556 -0.494 0.195
16 H1 H H1 N N N 0 0.62 -1.896 -0.629
17 HO1 H HO1 N N Y 0 -0.35 -2.488 1.472
18 H2 H H2 N N N 0 0.841 0.511 -1.12
19 HN2 H HN2 N N N 0 2.338 0.275 1.377
20 H3 H H3 N N N 0 0.016 0.898 1.796
21 HO3 H HO3 N N Y 0 0.183 3.186 1.125
22 H4 H H4 N N N 0 -2.003 1.953 0.854
23 HO4 H HO4 N N Y 0 -2.31 1.796 -1.51
24 H5 H H5 N N N 0 -2.079 -0.465 1.335
25 H61 H H6 N N N 0 -4.044 0.671 0.258
26 H81 H H8 N N N 0 4.564 -0.206 1.247
27 H82 H H8A N N N 0 4.89 -1.527 0.099
28 H83 H H8B N N N 0 5.227 0.158 -0.365
29 H62 H H14 N N N 0 -3.424 0.164 -1.331
30 HO6 H H15 N N Y 0 -4.989 -1.407 -0.444