Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : 8XV

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 56


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C17 C C1 N Y N 0 -4.237 -0.102 -0.164
2 C16 C C2 N Y N 0 -3.833 -1.338 0.372
3 C15 C C3 N N N 0 -2.404 -1.668 0.405
4 C19 C C4 N N N 0 -1.981 0.491 -0.625
5 C20 C C5 N Y N 0 -4.789 -2.232 0.864
6 C21 C C6 N Y N 0 -6.124 -1.894 0.821
7 C22 C C7 N Y N 0 -6.521 -0.672 0.29
8 C23 C C8 N Y N 0 -5.59 0.22 -0.194
9 C27 C C9 N N N 0 -4.235 4.452 -0.671
10 C33 C C10 N N N 0 8.283 1.46 0.42
11 C1 C C11 N Y N 0 2.833 -1.025 -0.179
12 C2 C C12 N Y N 0 2.107 -0.085 0.544
13 C3 C C13 N Y N 0 2.766 1.0 1.11
14 C4 C C14 N Y N 0 4.13 1.137 0.953
15 C5 C C15 N Y N 0 4.849 0.195 0.232
16 C6 C C16 N Y N 0 4.194 -0.89 -0.336
17 O7 O O1 N N N 0 6.194 0.334 0.081
18 S8 S S1 N N N 0 1.973 -2.387 -0.898
19 N9 N N1 N N N 0 0.363 -1.995 -0.834
20 C10 C C17 N N N 0 -0.056 -1.02 -0.089
21 N11 N N2 N N N 0 0.729 -0.234 0.702
22 O12 O O2 N N N 0 2.333 -2.414 -2.272
23 O13 O O3 N N N 0 2.157 -3.49 -0.021
24 C14 C C18 N N N 0 -1.502 -0.734 -0.101
25 N18 N N3 N N N 0 -3.293 0.781 -0.649
26 F24 F F1 N N N 0 -7.051 -2.754 1.295
27 C25 C C19 N N N 0 -3.731 2.064 -1.204
28 C26 C C20 N N N 0 -3.776 3.112 -0.091
29 O28 O O4 N N N 0 -1.185 1.301 -1.065
30 O29 O O5 N N N 0 -1.974 -2.844 0.911
31 C30 C C21 N N N 0 -4.232 5.664 0.263
32 C31 C C22 N N N 0 -5.557 5.027 -0.161
33 C32 C C23 N N N 0 6.801 1.474 0.692
34 N34 N N4 N N N 0 9.066 2.446 0.902
35 O35 O O6 N N N 0 8.771 0.562 -0.233
36 H40 H H2 N N N 0 -4.483 -3.183 1.276
37 H41 H H3 N N N 0 -7.571 -0.418 0.26
38 H42 H H4 N N N 0 -5.911 1.167 -0.604
39 H47 H H5 N N N 0 -3.982 4.623 -1.717
40 H36 H H6 N N N 0 2.21 1.736 1.671
41 H37 H H7 N N N 0 4.64 1.981 1.394
42 H38 H H8 N N N 0 4.751 -1.625 -0.897
43 H39 H H9 N N N 0 0.302 0.251 1.425
44 H44 H H11 N N N 0 -3.032 2.383 -1.977
45 H43 H H12 N N N 0 -4.725 1.951 -1.638
46 H46 H H13 N N N 0 -2.782 3.225 0.342
47 H45 H H14 N N N 0 -4.475 2.793 0.682
48 H48 H H15 N N N 0 -1.012 -2.925 0.956
49 H50 H H16 N N N 0 -3.905 5.507 1.291
50 H49 H H17 N N N 0 -3.978 6.632 -0.169
51 H51 H H18 N N N 0 -6.175 5.576 -0.872
52 H52 H H19 N N N 0 -6.101 4.451 0.588
53 H54 H H20 N N N 0 6.628 1.445 1.768
54 H53 H H21 N N N 0 6.364 2.383 0.279
55 H55 H H22 N N N 0 10.02 2.437 0.727
56 H56 H H23 N N N 0 8.675 3.164 1.424