Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : 8W5

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 65


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C1 C C1 N N N 0 -5.031 4.701 -1.099
2 C2 C C2 N N N 0 -4.884 3.39 -0.324
3 C3 C C3 N N N 0 -3.842 2.505 -1.011
4 C7 C C4 R N N 0 -2.533 0.168 1.449
5 C9 C C5 N N N 0 -1.113 0.431 2.021
6 C10 C C6 S N N 0 -0.221 0.375 0.776
7 C12 C C7 S N N 0 1.245 0.068 1.026
8 C14 C C8 N N N 0 1.872 1.184 1.865
9 C15 C C9 N N N 0 3.34 0.853 2.149
10 C16 C C10 N N N 0 4.036 0.612 0.823
11 C20 C C11 N N N 0 5.243 0.174 -1.724
12 C21 C C12 N N N 0 4.126 -0.475 -1.434
13 C22 C C13 R N N 0 3.415 -0.368 -0.129
14 C27 C C14 N N N 0 -0.21 -0.849 -1.405
15 C31 C C15 N N N 0 -3.105 -1.904 0.057
16 C33 C C16 N N N 0 -4.457 -1.952 -0.605
17 C35 C C17 N N N 0 -0.45 -2.136 0.73
18 C4 C C18 R N N 0 -3.695 1.194 -0.235
19 O6 O O1 N N N 0 -3.093 1.437 1.054
20 C17 C C19 N N N 0 5.156 1.269 0.555
21 C18 C C20 N N N 0 5.847 1.076 -0.729
22 O19 O O2 N N N 0 6.895 1.648 -0.963
23 C23 C C21 S N N 0 1.938 -0.026 -0.342
24 C25 C C22 S N N 0 1.304 -1.07 -1.256
25 C28 C C23 S N N 0 -0.822 -0.836 0.014
26 C29 C C24 S N N 0 -2.338 -0.608 0.113
27 O30 O O3 N N N 0 -2.77 0.314 -0.907
28 O32 O O4 N N N 0 -2.634 -2.905 0.543
29 O34 O O5 N N N 0 -4.977 -3.281 -0.531
30 O36 O O6 N N N 0 1.534 -2.37 -0.71
31 C37 C C25 N N N 0 3.443 -1.746 0.535
32 H1 H H1 N N N 0 -4.072 5.219 -1.122
33 H2 H H2 N N N 0 -5.352 4.486 -2.119
34 H3 H H3 N N N 0 -5.773 5.331 -0.61
35 H4 H H4 N N N 0 -4.563 3.605 0.695
36 H5 H H5 N N N 0 -5.843 2.872 -0.301
37 H6 H H6 N N N 0 -4.163 2.29 -2.03
38 H7 H H7 N N N 0 -2.883 3.023 -1.033
39 H8 H H8 N N N 0 -3.171 -0.367 2.152
40 H9 H H9 N N N 0 -1.062 1.415 2.488
41 H10 H H10 N N N 0 -0.835 -0.346 2.733
42 H11 H H11 N N N 0 -0.333 1.288 0.191
43 H12 H H12 N N N 0 1.337 -0.883 1.551
44 H13 H H13 N N N 0 1.811 2.125 1.319
45 H14 H H14 N N N 0 1.332 1.275 2.808
46 H15 H H15 N N N 0 3.812 1.689 2.666
47 H16 H H16 N N N 0 3.403 -0.043 2.766
48 H17 H H17 N N N 0 5.709 0.043 -2.689
49 H18 H H18 N N N 0 3.705 -1.121 -2.189
50 H19 H H19 N N N 0 -0.372 0.114 -1.889
51 H20 H H20 N N N 0 -0.664 -1.643 -1.998
52 H21 H H21 N N N 0 -5.135 -1.267 -0.097
53 H22 H H22 N N N 0 -4.361 -1.658 -1.651
54 H23 H H23 N N N 0 -1.007 -2.208 1.664
55 H24 H H24 N N N 0 -0.697 -2.985 0.093
56 H25 H H25 N N N 0 0.619 -2.14 0.943
57 H26 H H26 N N N 0 -4.666 0.713 -0.116
58 H27 H H27 N N N 0 5.564 1.951 1.286
59 H28 H H28 N N N 0 1.861 0.948 -0.826
60 H29 H H29 N N N 0 1.77 -1.012 -2.24
61 H30 H H30 N N N 0 -5.848 -3.386 -0.938
62 H31 H H31 N N N 0 1.16 -3.09 -1.236
63 H32 H H32 N N N 0 2.614 -1.828 1.238
64 H33 H H33 N N N 0 3.349 -2.519 -0.228
65 H34 H H34 N N N 0 4.385 -1.874 1.067