Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : 8J6

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 57


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C23 C C1 N N N 0 -5.611 1.445 0.39
2 C17 C C2 N N N 0 -5.302 0.133 1.114
3 C16 C C3 N N N 0 -3.79 -0.072 1.201
4 C22 C C4 N N N 0 -5.835 0.267 2.558
5 N2 N N1 N N N 0 -5.97 -0.997 0.493
6 C18 C C5 N N N 0 -5.407 -1.58 -0.711
7 C20 C C6 N N N 0 -5.776 -0.769 -1.957
8 C21 C C7 N N N 0 -6.018 -2.99 -0.887
9 C19 C C8 N N N 0 -3.891 -1.746 -0.632
10 C15 C C9 N N N 0 -3.231 -0.447 -0.171
11 N1 N N2 N N N 0 -1.781 -0.654 -0.062
12 C13 C C10 N Y N 0 -0.917 0.423 -0.175
13 N N N3 N Y N 0 0.376 0.357 -0.1
14 S S S1 N Y N 0 -1.404 2.093 -0.45
15 C14 C C11 N Y N 0 0.286 2.592 -0.433
16 C12 C C12 N Y N 0 1.046 1.501 -0.234
17 C10 C C13 N Y N 0 2.526 1.566 -0.169
18 C9 C C14 N Y N 0 3.173 2.801 -0.209
19 C8 C C15 N Y N 0 4.551 2.863 -0.149
20 C7 C C16 N Y N 0 5.296 1.704 -0.048
21 C2 C C20 N Y N 0 4.827 -2.019 0.155
22 C11 C C17 N Y N 0 3.272 0.396 -0.061
23 C6 C C18 N Y N 0 4.66 0.464 -0.006
24 C3 C C19 N Y N 0 5.462 -0.779 0.109
25 C1 C C21 N Y N 0 5.577 -3.172 0.256
26 C4 C C22 N Y N 0 6.852 -0.712 0.165
27 C5 C C23 N Y N 0 7.593 -1.872 0.271
28 C C C24 N Y N 0 6.958 -3.1 0.311
29 H1 H H1 N N N 0 -5.194 1.411 -0.616
30 H2 H H2 N N N 0 -6.691 1.583 0.333
31 H3 H H3 N N N 0 -5.168 2.276 0.94
32 H4 H H4 N N N 0 -3.319 0.851 1.546
33 H5 H H5 N N N 0 -3.572 -0.87 1.913
34 H6 H H6 N N N 0 -6.91 0.446 2.534
35 H7 H H7 N N N 0 -5.633 -0.653 3.107
36 H8 H H8 N N N 0 -5.338 1.102 3.052
37 H9 H H9 N N N 0 -6.967 -0.862 0.424
38 H11 H H11 N N N 0 -5.393 0.246 -1.855
39 H12 H H12 N N N 0 -5.337 -1.237 -2.838
40 H13 H H13 N N N 0 -6.86 -0.74 -2.063
41 H14 H H14 N N N 0 -7.101 -2.908 -0.978
42 H15 H H15 N N N 0 -5.611 -3.452 -1.786
43 H16 H H16 N N N 0 -5.771 -3.603 -0.02
44 H17 H H17 N N N 0 -3.65 -2.544 0.074
45 H18 H H18 N N N 0 -3.504 -2.02 -1.616
46 H19 H H19 N N N 0 -3.42 0.349 -0.888
47 H20 H H20 N N N 0 -1.429 -1.545 0.089
48 H21 H H21 N N N 0 0.649 3.6 -0.564
49 H22 H H22 N N N 0 2.596 3.71 -0.289
50 H23 H H23 N N N 0 5.049 3.821 -0.182
51 H24 H H24 N N N 0 6.374 1.759 -0.001
52 H25 H H25 N N N 0 2.774 -0.562 -0.029
53 H26 H H26 N N N 0 3.749 -2.076 0.113
54 H27 H H27 N N N 0 5.086 -4.134 0.292
55 H28 H H28 N N N 0 7.35 0.246 0.124
56 H29 H H29 N N N 0 8.671 -1.821 0.314
57 H30 H H30 N N N 0 7.541 -4.005 0.39