Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : 8H0

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 56


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C11 C C1 N Y N 0 3.759 1.182 0.346
2 C12 C C2 N Y N 0 4.224 0.176 -0.481
3 C13 C C3 N Y N 0 5.587 -0.103 -0.528
4 C14 C C4 N Y N 0 6.476 0.645 0.269
5 C15 C C5 N Y N 0 5.984 1.659 1.098
6 C16 C C6 N Y N 0 4.646 1.919 1.133
7 N18 N N1 N Y N 0 7.69 -0.841 -0.874
8 C21 C C7 N Y N 0 -0.733 -0.206 0.046
9 C22 C C8 N Y N 0 -2.109 0.082 -0.023
10 C27 C C9 N N N 0 -6.022 1.871 -1.279
11 C30 C C10 N N N 0 -4.258 2.914 0.769
12 C01 C C11 N N N 0 -5.073 -4.961 0.837
13 C02 C C12 N N N 0 -4.04 -3.843 0.992
14 C03 C C13 N N N 0 -3.594 -3.365 -0.391
15 C04 C C14 N Y N 0 -2.577 -2.264 -0.238
16 C05 C C15 N Y N 0 -1.253 -2.579 -0.168
17 C06 C C16 N Y N 0 -0.304 -1.556 -0.025
18 C07 C C17 N Y N 0 1.076 -1.823 0.052
19 N08 N N2 N Y N 0 1.905 -0.81 0.185
20 C09 C C18 N Y N 0 1.466 0.446 0.249
21 N10 N N3 N N N 0 2.391 1.467 0.39
22 C17 C C19 N Y N 0 7.81 0.119 -0.003
23 N19 N N4 N Y N 0 6.346 -1.009 -1.222
24 N20 N N5 N Y N 0 0.186 0.756 0.182
25 C23 C C20 N Y N 0 -3.005 -0.941 -0.163
26 O24 O O1 N N N 0 -2.544 1.367 0.048
27 C25 C C21 N N N 0 -3.957 1.573 0.094
28 C26 C C22 N N N 0 -4.518 1.59 -1.331
29 N28 N N6 N N N 0 -6.257 3.165 -0.625
30 C29 C C23 N N N 0 -5.769 3.157 0.76
31 H1 H H1 N N N 0 3.533 -0.391 -1.087
32 H2 H H2 N N N 0 6.662 2.234 1.711
33 H3 H H3 N N N 0 4.269 2.702 1.774
34 H5 H H5 N N N 0 -6.421 1.898 -2.292
35 H6 H H6 N N N 0 -6.519 1.083 -0.713
36 H7 H H7 N N N 0 -3.899 2.892 1.798
37 H8 H H8 N N N 0 -3.758 3.716 0.226
38 H9 H H9 N N N 0 -4.629 -5.793 0.29
39 H10 H H10 N N N 0 -5.391 -5.302 1.822
40 H11 H H11 N N N 0 -5.936 -4.585 0.287
41 H12 H H12 N N N 0 -4.485 -3.012 1.539
42 H13 H H13 N N N 0 -3.178 -4.22 1.542
43 H14 H H14 N N N 0 -3.15 -4.197 -0.937
44 H15 H H15 N N N 0 -4.457 -2.989 -0.941
45 H16 H H16 N N N 0 -0.937 -3.61 -0.221
46 H17 H H17 N N N 0 1.445 -2.837 0.003
47 H19 H H19 N N N 0 2.09 2.38 0.519
48 H20 H H20 N N N 0 8.733 0.464 0.44
49 H22 H H22 N N N 0 -4.06 -0.719 -0.221
50 H23 H H23 N N N 0 -4.424 0.767 0.66
51 H24 H H24 N N N 0 -4.345 0.623 -1.802
52 H25 H H25 N N N 0 -4.022 2.371 -1.908
53 H26 H H26 N N N 0 -7.233 3.417 -0.663
54 H28 H H28 N N N 0 -6.267 2.362 1.316
55 H29 H H29 N N N 0 -5.985 4.117 1.227
56 H4 H H4 N N N 0 6.005 -1.662 -1.853