Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : 7U5

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 68


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C10 C C1 N Y N 0 3.338 1.078 1.274
2 C15 C C2 N N N 0 4.741 6.937 0.815
3 C17 C C3 N N N 0 5.137 6.267 -1.967
4 C20 C C4 N Y N 0 3.924 1.7 -0.993
5 C22 C C5 N N N 0 1.721 -3.66 0.874
6 C24 C C6 N Y N 0 -0.559 -3.443 -0.134
7 C26 C C7 N Y N 0 0.075 -1.928 1.616
8 C28 C C8 N Y N 0 -2.102 -1.762 0.615
9 C02 C C9 N N N 0 4.01 -3.714 -0.079
10 C04 C C10 N N N 0 5.324 -5.731 -0.453
11 C05 C C11 N N N 0 5.093 -7.171 -0.915
12 C06 C C12 R N N 0 2.699 -2.97 -0.079
13 C08 C C13 N N N 0 3.305 -0.652 -0.523
14 C09 C C14 N Y N 0 3.529 0.74 -0.077
15 C11 C C15 N Y N 0 3.538 2.349 1.708
16 C12 C C16 N Y N 0 3.939 3.348 0.803
17 C14 C C17 N Y N 0 4.516 5.521 0.35
18 C16 C C18 N Y N 0 4.708 5.197 -0.996
19 C19 C C19 N Y N 0 4.135 3.02 -0.563
20 C23 C C20 N Y N 0 0.374 -2.991 0.783
21 C25 C C21 N Y N 0 -1.794 -2.836 -0.223
22 C27 C C22 N Y N 0 -1.156 -1.311 1.539
23 C29 C C23 N N N 0 -3.383 -1.126 0.529
24 C30 C C24 N N N 0 -4.432 -0.605 0.458
25 C31 C C25 N Y N 0 -5.713 0.031 0.371
26 C32 C C26 N Y N 0 -6.015 1.113 1.22
27 C33 C C27 N Y N 0 -7.221 1.73 1.156
28 C34 C C28 N Y N 0 -6.644 -0.42 -0.552
29 C35 C C29 N Y N 0 -7.896 0.207 -0.632
30 C36 C C30 N Y N 0 -8.19 1.292 0.233
31 C38 C C31 N Y N 0 -10.273 1.464 -0.711
32 C39 C C32 N Y N 0 -9.981 0.4 -1.568
33 N03 N N1 N N N 0 4.05 -5.008 -0.453
34 N07 N N2 N N N 0 2.921 -1.591 0.364
35 N13 N N3 N Y N 0 4.14 4.606 1.214
36 N18 N N4 N Y N 0 4.517 3.971 -1.423
37 N37 N N5 N Y N 0 -9.384 1.89 0.158
38 N40 N N6 N Y N 0 -8.817 -0.205 -1.513
39 O01 O O1 N N N 0 5.028 -3.148 0.257
40 O21 O O2 N N N 0 3.468 -0.95 -1.691
41 H10 H H1 N N N 0 3.025 0.319 1.975
42 H153 H H2 N N N 0 3.81 7.498 0.734
43 H152 H H3 N N N 0 5.071 6.93 1.854
44 H151 H H4 N N N 0 5.504 7.406 0.195
45 H173 H H5 N N N 0 6.226 6.305 -2.007
46 H171 H H6 N N N 0 4.744 6.038 -2.957
47 H172 H H7 N N N 0 4.752 7.232 -1.637
48 H20 H H8 N N N 0 4.07 1.436 -2.03
49 H222 H H9 N N N 0 1.625 -4.71 0.598
50 H221 H H10 N N N 0 2.095 -3.586 1.895
51 H24 H H11 N N N 0 -0.317 -4.271 -0.784
52 H26 H H12 N N N 0 0.808 -1.58 2.329
53 H041 H H13 N N N 0 5.74 -5.735 0.555
54 H042 H H14 N N N 0 6.021 -5.239 -1.132
55 H051 H H15 N N N 0 4.677 -7.168 -1.922
56 H053 H H16 N N N 0 6.041 -7.709 -0.915
57 H052 H H17 N N N 0 4.396 -7.663 -0.236
58 H06 H H18 N N N 0 2.283 -2.966 -1.086
59 H11 H H19 N N N 0 3.387 2.593 2.749
60 H25 H H20 N N N 0 -2.521 -3.19 -0.939
61 H27 H H21 N N N 0 -1.388 -0.481 2.191
62 H32 H H22 N N N 0 -5.278 1.455 1.931
63 H33 H H23 N N N 0 -7.439 2.559 1.813
64 H34 H H24 N N N 0 -6.407 -1.247 -1.205
65 H38 H H25 N N N 0 -11.236 1.949 -0.771
66 HN07 H H28 N N N 0 2.79 -1.353 1.295
67 H39 H H26 N N N 0 -10.725 0.064 -2.275
68 HN03 H H27 N N N 0 3.235 -5.461 -0.721