Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : 6YE

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 46


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 N01 N N1 N N N 0 2.363 0.6 0.023
2 C02 C C1 N N N 0 1.038 0.369 -0.054
3 O03 O O1 N N N 0 0.623 -0.771 -0.155
4 C04 C C2 N Y N 0 0.096 1.49 -0.015
5 C05 C C3 N Y N 0 0.421 2.855 0.098
6 N06 N N2 N Y N 0 -0.684 3.551 0.099
7 N07 N N3 N Y N 0 -1.78 2.689 -0.013
8 C08 C C4 N Y N 0 -1.309 1.409 -0.09
9 N09 N N4 N Y N 0 -2.145 0.377 -0.204
10 C10 C C5 N Y N 0 -3.453 0.567 -0.244
11 C11 C C6 N Y N 0 -3.975 1.874 -0.167
12 C12 C C7 N Y N 0 -3.126 2.921 -0.056
13 N13 N N5 N N N 0 -4.306 -0.513 -0.362
14 C14 C C8 N N N 0 -5.764 -0.335 -0.294
15 C15 C C9 N N N 0 -6.327 -1.321 0.734
16 N16 N N6 N N N 0 -5.883 -2.681 0.398
17 C17 C C10 N N N 0 -4.421 -2.799 0.479
18 C18 C C11 N N N 0 -3.78 -1.872 -0.566
19 C19 C C12 N Y N 0 3.265 -0.474 -0.014
20 C20 C C13 N Y N 0 4.681 -0.41 0.055
21 N21 N N7 N Y N 0 5.128 -1.65 -0.015
22 N22 N N8 N Y N 0 4.146 -2.471 -0.119
23 C23 C C14 N Y N 0 2.968 -1.797 -0.117
24 C24 C C15 N N N 0 5.499 0.811 0.181
25 N25 N N9 N N N 0 6.842 0.72 0.235
26 O26 O O2 N N N 0 4.96 1.9 0.235
27 C27 C C16 N N N 0 4.279 -3.927 -0.22
28 H1 H H1 N N N 0 2.694 1.508 0.1
29 H2 H H2 N N N 0 1.42 3.26 0.173
30 H3 H H3 N N N 0 -5.042 2.038 -0.199
31 H4 H H4 N N N 0 -3.508 3.93 0.004
32 H5 H H5 N N N 0 -5.994 0.686 0.014
33 H6 H H6 N N N 0 -6.204 -0.533 -1.271
34 H7 H H7 N N N 0 -5.967 -1.056 1.729
35 H8 H H8 N N N 0 -7.417 -1.281 0.719
36 H9 H H9 N N N 0 -6.334 -3.365 0.988
37 H11 H H11 N N N 0 -4.088 -2.513 1.476
38 H12 H H12 N N N 0 -4.128 -3.829 0.278
39 H13 H H13 N N N 0 -4.032 -2.215 -1.569
40 H14 H H14 N N N 0 -2.697 -1.868 -0.439
41 H15 H H15 N N N 0 1.981 -2.229 -0.188
42 H16 H H16 N N N 0 7.272 -0.149 0.192
43 H17 H H17 N N N 0 7.38 1.523 0.317
44 H18 H H18 N N N 0 4.265 -4.363 0.78
45 H19 H H19 N N N 0 3.45 -4.328 -0.802
46 H20 H H20 N N N 0 5.22 -4.173 -0.71