Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : 6KL

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 49


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C1 C C1 N N N 0 -0.124 2.37 1.148
2 O1B O O1 N N N 0 0.259 1.443 2.041
3 O2 O O2 N N N 0 -0.499 3.203 -1.069
4 C2 C C2 R N N 0 -0.149 2.036 -0.321
5 C3 C C3 N N N 0 1.235 1.546 -0.757
6 C4 C C4 S N N 0 1.577 0.263 0.006
7 O1A O O3 N N N 0 -0.454 3.47 1.524
8 C11 C C11 N N N 0 1.878 -4.169 0.849
9 C10 C C10 N N N 0 1.592 -2.928 0.044
10 O10 O O10 N N N 0 2.111 -2.777 -1.043
11 N5 N N5 N N N 0 0.761 -1.985 0.53
12 C5 C C5 R N N 0 0.483 -0.778 -0.253
13 N4 N N4 N N N 0 2.866 -0.255 -0.459
14 CA4 C CA4 N N N 0 4.011 0.206 0.081
15 OA4 O OA4 N N N 0 3.975 1.05 0.952
16 CM4 C CM4 N N N 0 5.338 -0.326 -0.398
17 CM2 C CM2 N N N 0 -0.668 2.967 -2.468
18 O6 O O6 N N N 0 -1.114 1.01 -0.561
19 C6 C C6 R N N 0 -0.871 -0.199 0.163
20 C7 C C7 R N N 0 -1.977 -1.21 -0.148
21 O7 O O7 N N N 0 -1.913 -1.576 -1.528
22 C8 C C8 R N N 0 -3.34 -0.584 0.152
23 O8 O O8 N N N 0 -3.403 -0.219 1.531
24 C9 C C9 N N N 0 -4.445 -1.595 -0.16
25 O9 O O9 N N N 0 -5.721 -0.974 0.009
26 HO1B H H1 N N N 0 0.258 1.704 2.972
27 H32 H H2 N N N 0 1.229 1.344 -1.828
28 H31 H H3 N N N 0 1.978 2.312 -0.535
29 H4 H H4 N N N 0 1.631 0.476 1.073
30 H111 H H5 N N N 0 2.566 -4.809 0.298
31 H113 H H6 N N N 0 2.327 -3.888 1.802
32 H112 H H7 N N N 0 0.947 -4.707 1.03
33 HN5 H H8 N N N 0 0.346 -2.105 1.399
34 H5 H H9 N N N 0 0.463 -1.029 -1.314
35 H10 H H10 N N N 0 2.895 -0.929 -1.156
36 H11 H H11 N N N 0 5.171 -1.07 -1.176
37 H12 H H12 N N N 0 5.934 0.493 -0.799
38 H13 H H13 N N N 0 5.867 -0.786 0.437
39 H14 H H14 N N N 0 -1.391 2.166 -2.617
40 H15 H H15 N N N 0 -1.029 3.876 -2.949
41 H16 H H16 N N N 0 0.288 2.68 -2.906
42 H6 H H17 N N N 0 -0.863 0.013 1.232
43 H7 H H18 N N N 0 -1.841 -2.098 0.469
44 HO7 H H19 N N Y 0 -2.026 -0.833 -2.137
45 H8 H H20 N N N 0 -3.476 0.304 -0.466
46 HO8 H H21 N N Y 0 -3.29 -0.961 2.141
47 H92 H H22 N N N 0 -4.342 -1.941 -1.188
48 H91 H H23 N N N 0 -4.362 -2.444 0.519
49 HO9 H H24 N N Y 0 -6.47 -1.558 -0.172