Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : 5FY

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 59


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C01 C C1 N N N 0 -3.829 2.403 1.111
2 C02 C C2 N Y N 0 -3.842 1.588 -0.156
3 C03 C C3 N Y N 0 -5.019 1.412 -0.852
4 C04 C C4 N Y N 0 -5.032 0.661 -2.02
5 O01 O O1 N N N 0 -6.194 0.49 -2.703
6 C05 C C5 N Y N 0 -3.86 0.083 -2.493
7 C06 C C6 N Y N 0 -2.679 0.253 -1.804
8 C07 C C7 N Y N 0 -2.66 1.013 -0.63
9 C08 C C8 N N N 0 -1.398 1.202 0.108
10 C09 C C9 N N N 0 -0.785 0.229 0.799
11 C10 C C10 N Y N 0 -1.298 -1.149 0.905
12 C11 C C11 N Y N 0 -0.69 -2.181 0.184
13 C12 C C12 N Y N 0 -1.173 -3.467 0.287
14 C13 C C13 N Y N 0 -2.262 -3.739 1.105
15 O02 O O2 N N N 0 -2.734 -5.009 1.204
16 C14 C C14 N Y N 0 -2.868 -2.717 1.824
17 C15 C C15 N Y N 0 -2.389 -1.429 1.732
18 C16 C C16 N N N 0 -3.044 -0.322 2.518
19 C17 C C17 S N N 0 0.517 0.714 1.47
20 S01 S S1 S N N 0 -0.028 2.433 1.926
21 O03 O O3 N N N 0 1.113 3.265 2.086
22 C18 C C18 S N N 0 -0.631 2.54 0.166
23 C19 C C19 N N N 0 0.693 2.16 -0.582
24 C20 C C20 S N N 0 1.39 1.047 0.212
25 S02 S S2 N N N 0 1.559 -0.431 -0.826
26 O04 O O4 N N N 0 2.062 -1.52 -0.064
27 O05 O O5 N N N 0 0.42 -0.586 -1.661
28 O06 O O6 N N N 0 2.688 -0.093 -1.788
29 C21 C C21 N Y N 0 3.925 -0.134 -1.226
30 C22 C C22 N Y N 0 4.652 -1.316 -1.234
31 C23 C C23 N Y N 0 5.909 -1.357 -0.662
32 C24 C C24 N Y N 0 6.444 -0.218 -0.08
33 O07 O O7 N N N 0 7.681 -0.259 0.483
34 C25 C C25 N Y N 0 5.718 0.963 -0.073
35 C26 C C26 N Y N 0 4.463 1.007 -0.649
36 H1 H H1 N N N 0 -4.144 1.78 1.948
37 H2 H H2 N N N 0 -2.821 2.775 1.294
38 H3 H H3 N N N 0 -4.514 3.246 1.008
39 H4 H H4 N N N 0 -5.932 1.86 -0.489
40 H5 H H5 N N N 0 -6.361 1.169 -3.371
41 H6 H H6 N N N 0 -3.875 -0.501 -3.401
42 H7 H H7 N N N 0 -1.768 -0.197 -2.172
43 H10 H H10 N N N 0 0.156 -1.97 -0.453
44 H11 H H11 N N N 0 -0.705 -4.265 -0.271
45 H12 H H12 N N N 0 -2.324 -5.528 1.909
46 H13 H H13 N N N 0 -3.715 -2.934 2.459
47 H14 H H14 N N N 0 -3.908 0.052 1.968
48 H15 H H15 N N N 0 -3.368 -0.706 3.485
49 H16 H H16 N N N 0 -2.331 0.488 2.669
50 H17 H H17 N N N 0 0.949 0.09 2.253
51 H19 H H19 N N N 0 -1.161 3.442 -0.139
52 H20 H H20 N N N 0 0.46 1.804 -1.586
53 H21 H H21 N N N 0 1.344 3.032 -0.644
54 H22 H H22 N N N 0 2.376 1.386 0.531
55 H23 H H23 N N N 0 4.235 -2.203 -1.687
56 H24 H H24 N N N 0 6.475 -2.277 -0.669
57 H25 H H25 N N N 0 8.399 -0.045 -0.128
58 H26 H H26 N N N 0 6.136 1.852 0.376
59 H27 H H27 N N N 0 3.897 1.927 -0.643