Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : 3RF

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 46


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C02 C C7 N Y N 0 -5.202 -2.314 0.107
2 C03 C C8 N Y N 0 -4.728 -1.201 0.788
3 C04 C C9 N Y N 0 -3.392 -0.861 0.711
4 C05 C C10 N Y N 0 -4.332 -3.089 -0.648
5 C06 C C11 N Y N 0 -2.994 -2.753 -0.72
6 C07 C C12 N Y N 0 -2.523 -1.633 -0.048
7 C09 C C13 N Y N 0 -0.785 0.039 -0.1
8 C11 C C14 N Y N 0 -1.395 2.266 -0.1
9 C12 C C15 N Y N 0 -0.025 2.622 -0.056
10 C13 C C1 N Y N 0 0.338 3.973 -0.034
11 C14 C C16 N Y N 0 -0.633 4.931 -0.051
12 C15 C C2 N Y N 0 -1.98 4.583 -0.09
13 C16 C C17 N Y N 0 -2.367 3.276 -0.112
14 C17 C C3 N Y N 0 0.939 1.584 -0.034
15 C19 C C18 N Y N 0 3.225 0.831 0.031
16 C22 C C4 N Y N 0 4.106 -1.216 0.042
17 C23 C C19 N N N 0 4.269 -2.714 0.035
18 C24 C C5 N N N 0 5.426 -3.302 0.845
19 C25 C C20 N N N 0 5.492 -3.288 -0.684
20 C26 C C6 N Y N 0 2.934 -0.543 0.011
21 H011 H H6 N N N 0 -7.164 -2.119 0.715
22 H012 H H7 N N N 0 -6.888 -3.435 -0.292
23 H031 H H8 N N N 0 -5.405 -0.6 1.379
24 H041 H H9 N N N 0 -3.024 0.0050 1.241
25 H051 H H10 N N N 0 -4.7 -3.955 -1.178
26 H061 H H11 N N N 0 -2.318 -3.353 -1.311
27 H081 H H12 N N N 0 -0.493 -1.987 -0.189
28 H131 H H1 N N N 0 1.38 4.255 0.0010
29 H141 H H13 N N N 0 -0.353 5.974 -0.034
30 H151 H H2 N N N 0 -2.73 5.36 -0.099
31 H161 H H14 N N N 0 -3.416 3.02 -0.137
32 H181 H H15 N N N 0 2.586 2.794 0.026
33 H211 H H16 N N N 0 6.053 -0.505 0.115
34 H231 H H17 N N N 0 3.344 -3.288 -0.01
35 H241 H H3 N N N 0 6.07 -2.605 1.383
36 H242 H H4 N N N 0 5.262 -4.263 1.333
37 H251 H H18 N N N 0 6.178 -2.582 -1.151
38 H252 H H19 N N N 0 5.371 -4.24 -1.201
39 H261 H H5 N N N 0 1.948 -0.983 -0.023
40 N01 N N1 N N N 0 -6.557 -2.658 0.185
41 N08 N N2 N N N 0 -1.166 -1.291 -0.122
42 N10 N N3 N Y N 0 -1.724 0.966 -0.121
43 N18 N N4 N N N 0 2.287 1.871 0.01
44 N20 N N5 N Y N 0 4.529 0.97 0.072
45 N21 N N6 N Y N 0 5.104 -0.308 0.086
46 N27 N N7 N Y N 0 0.512 0.329 -0.058