Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : 3PC

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 72


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C15 C C15 N N N 0 10.321 1.594 -0.459
2 C14 C C14 N N N 0 9.006 2.236 -0.012
3 C13 C C13 N N N 0 7.837 1.337 -0.419
4 C12 C C12 N N N 0 6.522 1.979 0.029
5 C11 C C11 N N N 0 5.352 1.08 -0.378
6 C10 C C10 N N N 0 4.056 1.712 0.063
7 O7 O O7 N N N 0 4.068 2.773 0.642
8 O6 O O6 N N N 0 2.89 1.097 -0.189
9 C9 C C9 N N N 0 1.682 1.764 0.264
10 C8 C C8 S N N 0 0.463 0.919 -0.109
11 O5 O O5 N N N 0 0.503 -0.337 0.618
12 C16 C C16 N N N 0 1.139 -1.362 0.028
13 O8 O O8 N N N 0 1.645 -1.214 -1.059
14 C17 C C17 N N N 0 1.222 -2.697 0.723
15 C18 C C18 N N N 0 1.993 -3.682 -0.158
16 C19 C C19 N N N 0 2.077 -5.038 0.547
17 C20 C C20 N N N 0 2.848 -6.023 -0.333
18 C21 C C21 N N N 0 2.932 -7.379 0.372
19 C7 C C7 N N N 0 -0.815 1.678 0.256
20 C6 C C6 N N N 0 -2.033 0.89 -0.23
21 P1 P P1 N N N 0 -3.555 1.794 0.205
22 O2 O O2 N N N -1 -3.695 1.858 1.742
23 O3 O O3 N N N 0 -3.482 3.229 -0.365
24 O1 O O1 N N N 0 -4.828 1.033 -0.42
25 C1 C C1 N N N 0 -7.527 -0.385 1.125
26 C5 C C5 N N N 0 -6.159 1.549 -0.343
27 C4 C C4 N N N 0 -7.122 0.582 -1.033
28 N1 N N1 N N N 1 -7.182 -0.674 -0.273
29 C2 C C2 N N N 0 -8.205 -1.552 -0.858
30 C3 C C3 N N N 0 -5.875 -1.342 -0.327
31 H151 H 1H15 N N N 0 10.43 0.619 0.016
32 H152 H 2H15 N N N 0 10.316 1.471 -1.542
33 H153 H 3H15 N N N 0 11.155 2.234 -0.17
34 H141 H 1H14 N N N 0 9.012 2.358 1.071
35 H142 H 2H14 N N N 0 8.898 3.21 -0.488
36 H131 H 1H13 N N N 0 7.831 1.215 -1.502
37 H132 H 2H13 N N N 0 7.945 0.362 0.057
38 H121 H 1H12 N N N 0 6.527 2.101 1.112
39 H122 H 2H12 N N N 0 6.413 2.954 -0.447
40 H111 H 1H11 N N N 0 5.346 0.958 -1.461
41 H112 H 2H11 N N N 0 5.46 0.105 0.098
42 H91 H 1H9 N N N 0 1.72 1.889 1.346
43 H92 H 2H9 N N N 0 1.607 2.742 -0.212
44 H8 H H8 N N N 0 0.473 0.72 -1.181
45 H171 H 1H17 N N N 0 1.739 -2.579 1.675
46 H172 H 2H17 N N N 0 0.216 -3.077 0.9
47 H181 H 1H18 N N N 0 1.476 -3.8 -1.11
48 H182 H 2H18 N N N 0 2.999 -3.302 -0.335
49 H191 H 1H19 N N N 0 2.594 -4.92 1.5
50 H192 H 2H19 N N N 0 1.071 -5.418 0.724
51 H201 H 1H20 N N N 0 2.331 -6.141 -1.286
52 H202 H 2H20 N N N 0 3.854 -5.643 -0.51
53 H211 H 1H21 N N N 0 3.449 -7.261 1.325
54 H212 H 2H21 N N N 0 1.926 -7.759 0.549
55 H213 H 3H21 N N N 0 3.482 -8.081 -0.255
56 H71 H 1H7 N N N 0 -0.869 1.8 1.337
57 H72 H 2H7 N N N 0 -0.803 2.659 -0.22
58 H61 H 1H6 N N N 0 -1.979 0.768 -1.312
59 H62 H 2H6 N N N 0 -2.044 -0.09 0.246
60 H51 H 1H5 N N N 0 -6.445 1.663 0.703
61 H52 H 2H5 N N N 0 -6.201 2.519 -0.839
62 H41 H 1H4 N N N 0 -8.116 1.028 -1.077
63 H42 H 2H4 N N N 0 -6.77 0.378 -2.044
64 H11 H 1H1 N N N 0 -8.497 0.111 1.165
65 H12 H 2H1 N N N 0 -7.571 -1.316 1.689
66 H13 H 3H1 N N N 0 -6.768 0.267 1.559
67 H21 H 1H2 N N N 0 -7.949 -1.767 -1.896
68 H22 H 2H2 N N N 0 -8.249 -2.484 -0.294
69 H23 H 3H2 N N N 0 -9.175 -1.056 -0.818
70 H31 H 1H3 N N N 0 -5.157 -0.785 0.276
71 H32 H 2H3 N N N 0 -5.968 -2.355 0.063
72 H33 H 3H3 N N N 0 -5.529 -1.38 -1.36