Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : 3AG

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 37


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C1 C C1 N N N 0 3.679 2.744 -0.821
2 C2 C C2 N N N 0 4.626 2.101 0.16
3 C3 C C3 N N N 0 5.426 2.959 1.107
4 C4 C C4 N N N 0 4.753 0.798 0.19
5 O1 O O1 N N N 0 -2.609 -1.611 1.242
6 C5 C C5 N N N 0 3.858 -0.066 -0.661
7 C6 C C6 N N N 0 3.168 -1.109 0.221
8 N1 N N1 S N N 0 2.296 -1.951 -0.608
9 C7 C C7 N N N 0 1.487 -2.759 0.315
10 C8 C C8 N N N 0 0.3 -1.931 0.811
11 C9 C C9 N N N 0 3.171 -2.884 -1.329
12 O2 O O2 N N N 0 -0.541 -1.594 -0.294
13 P1 P P1 N N N 0 -1.763 -0.729 0.298
14 O3 O O3 N N N 0 -2.684 -0.202 -0.913
15 O4 O O4 N N N -1 -1.205 0.479 1.083
16 P2 P P2 N N N 0 -3.53 1.045 -0.347
17 O5 O O5 N N N 0 -2.631 2.328 -0.347
18 O6 O O6 N N N -1 -4.781 1.284 -1.258
19 O7 O O7 N N N -1 -3.999 0.736 1.116
20 HC11 H 1HC1 N N N 0 2.674 2.759 -0.399
21 HC12 H 2HC1 N N N 0 4.003 3.765 -1.023
22 HC13 H 3HC1 N N N 0 3.675 2.173 -1.749
23 HC31 H 1HC3 N N N 0 6.049 2.322 1.735
24 HC32 H 2HC3 N N N 0 6.06 3.637 0.535
25 HC33 H 3HC3 N N N 0 4.748 3.537 1.735
26 HC4 H HC4 N N N 0 5.499 0.343 0.825
27 HC51 H 1HC5 N N N 0 4.456 -0.571 -1.42
28 HC52 H 2HC5 N N N 0 3.106 0.556 -1.145
29 HC61 H 1HC6 N N N 0 2.57 -0.604 0.981
30 HC62 H 2HC6 N N N 0 3.92 -1.731 0.705
31 HC71 H 1HC7 N N N 0 1.121 -3.645 -0.203
32 HC72 H 2HC7 N N N 0 2.099 -3.061 1.164
33 HC81 H 1HC8 N N N 0 -0.269 -2.511 1.537
34 HC82 H 2HC8 N N N 0 0.665 -1.018 1.282
35 HC91 H 1HC9 N N N 0 3.733 -2.341 -2.089
36 HC92 H 2HC9 N N N 0 3.864 -3.348 -0.628
37 HC93 H 3HC9 N N N 0 2.566 -3.655 -1.807