Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : 24D

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 43


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C11 C C11 N N N 0 -2.109 2.641 -0.753
2 C12 C C12 N N N 0 -3.207 2.175 0.209
3 C13 C C13 N N N 0 -3.54 0.709 -0.075
4 C14 C C14 N N N 0 -2.296 -0.153 0.157
5 C15 C C15 N N N 0 -1.187 0.287 -0.811
6 C17 C C17 N Y N 0 -5.418 -0.684 0.336
7 C19 C C19 N Y N 0 -7.232 -2.053 0.689
8 C2 C C2 N Y N 0 5.505 -1.301 -0.338
9 C20 C C20 N Y N 0 -7.061 -2.588 -0.578
10 C21 C C21 N Y N 0 -6.02 -2.115 -1.361
11 C23 C C23 N Y N 0 3.813 -0.066 0.823
12 C25 C C25 N Y N 0 4.722 -1.107 0.786
13 C3 C C3 N Y N 0 5.371 -0.459 -1.428
14 C4 C C4 N Y N 0 4.458 0.579 -1.392
15 C5 C C5 N Y N 0 3.68 0.776 -0.267
16 C6 C C6 N N N 0 2.685 1.907 -0.228
17 C8 C C8 N N N 0 0.272 2.207 -0.389
18 CL1 CL CL1 N N N 0 6.652 -2.604 -0.384
19 CL24 CL CL24 N N N 0 2.833 0.181 2.235
20 H11 H H11 N N N 0 -1.799 3.652 -0.491
21 H11A H H11A N N N 0 -2.489 2.626 -1.775
22 H12 H H12 N N N 0 -2.857 2.277 1.236
23 H12A H H12A N N N 0 -4.099 2.785 0.065
24 H13 H H13 N N N 0 -3.866 0.604 -1.11
25 H14 H H14 N N N 0 -1.955 -0.029 1.185
26 H14A H H14A N N N 0 -2.54 -1.2 -0.022
27 H15 H H15 N N N 0 -1.493 0.084 -1.837
28 H15A H H15A N N N 0 -0.269 -0.255 -0.587
29 H19 H H19 N N N 0 -8.033 -2.4 1.325
30 H20 H H20 N N N 0 -7.724 -3.357 -0.947
31 H21 H H21 N N N 0 -5.859 -2.51 -2.353
32 H25 H H25 N N N 0 4.824 -1.767 1.635
33 H3 H H3 N N N 0 5.98 -0.612 -2.307
34 H4 H H4 N N N 0 4.354 1.236 -2.243
35 H6 H H6 N N N 0 2.759 2.423 0.729
36 H6A H H6A N N N 0 2.899 2.607 -1.036
37 HN7 H HN7 N N N 0 1.196 0.418 -0.502
38 N10 N N10 N N N 0 -0.963 1.729 -0.64
39 N18 N N18 N Y N 0 -6.402 -1.113 1.11
40 N22 N N22 N Y N 0 -5.229 -1.17 -0.88
41 N7 N N7 N N N 0 1.331 1.373 -0.392
42 O16 O O16 N N N 0 -4.586 0.28 0.799
43 O9 O O9 N N N 0 0.431 3.39 -0.161