Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : 1RI

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 46


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 N1 N N1 N N N 0 0.002 1.806 -0.19
2 N3 N N2 N Y N 0 -6.068 -2.858 -0.061
3 C4 C C1 N Y N 0 4.584 0.395 -0.938
4 C5 C C2 N Y N 0 6.374 -0.904 -0.204
5 C6 C C3 N Y N 0 7.389 -1.817 -0.452
6 C7 C C4 N Y N 0 8.301 -2.12 0.54
7 C8 C C5 N Y N 0 8.204 -1.514 1.779
8 C10 C C6 N Y N 0 6.279 -0.297 1.04
9 C13 C C7 N Y N 0 2.772 2.439 -0.443
10 C15 C C8 N Y N 0 -3.637 2.166 0.32
11 C17 C C9 N Y N 0 -5.833 2.35 0.623
12 C20 C C10 N Y N 0 -5.271 -3.886 -0.304
13 C21 C C11 N Y N 0 -3.91 -3.667 -0.449
14 C22 C C12 N Y N 0 -3.431 -2.371 -0.333
15 C1 C C13 N N N 0 0.882 0.816 -0.435
16 C11 C C14 N Y N 0 5.021 1.707 -0.816
17 C12 C C15 N Y N 0 4.116 2.723 -0.57
18 C14 C C16 N N N 0 -2.213 2.471 0.181
19 C16 C C17 N Y N 0 -4.63 3.071 0.568
20 C18 C C18 N Y N 0 -5.525 1.044 0.405
21 C19 C C19 N Y N 0 -5.577 -1.631 0.045
22 C2 C C20 N Y N 0 2.322 1.123 -0.569
23 C3 C C21 N Y N 0 3.237 0.099 -0.818
24 C9 C C22 N Y N 0 7.194 -0.603 2.028
25 N2 N N3 N N N 0 -1.362 1.514 -0.056
26 N4 N N4 N Y N 0 -4.281 -1.388 -0.089
27 O1 O O1 N N N 0 0.493 -0.331 -0.545
28 O2 O O2 N N N 0 5.478 -0.6 -1.18
29 O3 O O3 N Y N 0 -4.198 0.941 0.221
30 S1 S S1 N N N 0 -6.675 -0.292 0.37
31 H1 H H1 N N N 0 0.312 2.721 -0.102
32 H2 H H2 N N N 0 7.465 -2.291 -1.42
33 H3 H H3 N N N 0 9.091 -2.831 0.347
34 H4 H H4 N N N 0 8.918 -1.752 2.553
35 H5 H H5 N N N 0 5.49 0.414 1.236
36 H6 H H6 N N N 0 2.068 3.235 -0.251
37 H7 H H7 N N N 0 -6.817 2.757 0.804
38 H8 H H8 N N N 0 -5.677 -4.883 -0.388
39 H9 H H9 N N N 0 -3.237 -4.488 -0.648
40 H10 H H10 N N N 0 -2.376 -2.167 -0.44
41 H11 H H11 N N N 0 6.072 1.935 -0.915
42 H12 H H12 N N N 0 4.463 3.741 -0.477
43 H13 H H13 N N N 0 -1.868 3.49 0.274
44 H14 H H14 N N N 0 -4.512 4.137 0.697
45 H15 H H15 N N N 0 2.895 -0.92 -0.916
46 H16 H H16 N N N 0 7.12 -0.131 2.997