Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : 1M9

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 61


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C1 C C1 N N N 0 -5.307 1.442 0.732
2 C2 C C2 N N N 0 -6.795 1.112 0.866
3 C3 C C3 N N N 0 -7.393 0.881 -0.522
4 C7 C C7 N N N 0 -3.12 0.601 -0.078
5 C4 C C4 N N N 0 -6.672 -0.285 -1.201
6 C5 C C5 N N N 0 -5.184 0.045 -1.335
7 C6 C C6 N N N 0 -4.585 0.276 0.054
8 O8 O O8 N N N 0 -2.739 1.746 0.047
9 C9 C C9 N N N 0 -2.703 -1.74 -0.608
10 N10 N N10 N N N 0 -2.232 -0.38 -0.336
11 C11 C C11 N Y N 0 -0.867 -0.1 -0.344
12 C12 C C12 N Y N 0 -0.146 -0.077 0.86
13 C13 C C13 N Y N 0 1.224 0.198 0.84
14 C14 C C14 N Y N 0 1.859 0.446 -0.363
15 C15 C C15 N Y N 0 1.139 0.422 -1.552
16 C16 C C16 N Y N 0 -0.214 0.151 -1.543
17 C17 C C17 N N N 0 -0.83 -0.342 2.138
18 O18 O O18 N N N 0 -2.037 -0.484 2.163
19 O19 O O19 N N N 0 -0.118 -0.427 3.279
20 O20 O O20 N N N 0 3.191 0.714 -0.383
21 C21 C C21 N Y N 0 4.054 -0.326 -0.242
22 C22 C C22 N Y N 0 3.572 -1.626 -0.192
23 C23 C C23 N Y N 0 4.451 -2.682 -0.049
24 C24 C C24 N Y N 0 5.81 -2.445 0.044
25 C25 C C25 N Y N 0 6.293 -1.15 -0.004
26 C26 C C26 N Y N 0 5.419 -0.091 -0.153
27 C27 C C27 N N N 0 5.946 1.32 -0.206
28 C28 C C28 N N N 0 -8.881 0.551 -0.388
29 C29 C C29 N N N 0 -2.15 -2.212 -1.954
30 C30 C C30 N N N 0 -2.218 -2.679 0.499
31 F31 F F31 N N N 0 7.339 1.302 -0.086
32 F32 F F32 N N N 0 5.59 1.905 -1.427
33 F33 F F33 N N N 0 5.396 2.063 0.844
34 H1 H H1 N N N 0 -5.188 2.343 0.13
35 H2 H H2 N N N 0 -4.881 1.607 1.722
36 H3 H H3 N N N 0 -6.914 0.212 1.468
37 H4 H H4 N N N 0 -7.309 1.943 1.35
38 H5 H H5 N N N 0 -7.274 1.781 -1.125
39 H6 H H6 N N N 0 -6.791 -1.186 -0.599
40 H7 H H7 N N N 0 -7.098 -0.451 -2.19
41 H8 H H8 N N N 0 -4.669 -0.786 -1.818
42 H9 H H9 N N N 0 -5.064 0.945 -1.937
43 H10 H H10 N N N 0 -4.705 -0.625 0.656
44 H11 H H11 N N N 0 -3.793 -1.748 -0.64
45 H12 H H12 N N N 0 1.785 0.218 1.762
46 H13 H H13 N N N 0 1.641 0.617 -2.488
47 H14 H H14 N N N 0 -0.765 0.129 -2.471
48 H15 H H15 N N N 0 -0.61 -0.602 4.092
49 H16 H H16 N N N 0 2.511 -1.812 -0.265
50 H17 H H17 N N N 0 4.076 -3.695 -0.01
51 H18 H H18 N N N 0 6.495 -3.272 0.156
52 H19 H H19 N N N 0 7.354 -0.967 0.069
53 H20 H H20 N N N 0 -9.396 1.381 0.095
54 H21 H H21 N N N 0 -9.308 0.386 -1.378
55 H22 H H22 N N N 0 -9.001 -0.35 0.214
56 H23 H H23 N N N 0 -2.581 -3.182 -2.204
57 H24 H H24 N N N 0 -2.41 -1.489 -2.727
58 H25 H H25 N N N 0 -1.066 -2.301 -1.89
59 H26 H H26 N N N 0 -1.136 -2.597 0.596
60 H27 H H27 N N N 0 -2.69 -2.402 1.442
61 H28 H H28 N N N 0 -2.484 -3.705 0.248