PDBe < PISA < EMBL-EBI

PISA Interface List.

Session Map (id=678-HO-3B1)

Interfaces in PDB 3p70 crystal.
Space symmetry group: P 1. Resolution: 2.55 Å

STRUCTURAL BASIS OF THROMBIN-MEDIATED FACTOR V ACTIVATION: ESSENTIAL ROLE OF THE HIRUDIN-LIKE SEQUENCE GLU666-GLU672 FOR PROCESSING AT THE HEAVY CHAIN-B DOMAIN JUNCTION

Interfaces

##			Structure 1				×	Structure 2						interface area, Å²	ΔⁱG kcal/mol	ΔⁱG P-value	N_HB	N_SB	N_DS	CSS
Id	NN	«»	Range	ⁱN_at	ⁱN_res	Surface Å²	×	Range	Symmetry op-n	Sym.ID	ⁱN_at	ⁱN_res	Surface Å²	interface area, Å²	ΔⁱG kcal/mol	ΔⁱG P-value	N_HB	N_SB	N_DS	CSS
1	`1`		H	`126`	`35`	`12453`	`◊`	G	x,y,z	`1_555`	`97`	`23`	`2875`	`1039.7`	`-8.3`	`0.429`	`20`	`8`	`1`	`0.889`
	`2`		B	`125`	`34`	`12292`	`◊`	A	x,y,z	`1_555`	`100`	`23`	`2995`	`1034.9`	`-8.8`	`0.438`	`23`	`8`	`1`	`0.889`
	`3`		F	`125`	`34`	`12334`	`◊`	E	x,y,z	`1_555`	`97`	`24`	`2992`	`1010.7`	`-7.9`	`0.457`	`24`	`7`	`1`	`0.889`
	`4`		D	`127`	`35`	`12213`	`◊`	C	x,y,z	`1_555`	`98`	`22`	`2990`	`1007.4`	`-10.6`	`0.356`	`22`	`6`	`1`	`0.889`
	*Average:*													`1023.2`	`-8.9`	`0.420`	`22`	`7`	`1`	`0.889`
2	`5`		F	`52`	`13`	`12334`	`◊`	D	x,y,z	`1_555`	`49`	`13`	`12213`	`420.4`	`-0.3`	`0.490`	`3`	`3`	`0`	`0.000`
	`6`		H	`49`	`13`	`12453`	`◊`	B	x,y,z	`1_555`	`48`	`13`	`12292`	`396.6`	`-0.9`	`0.437`	`6`	`3`	`0`	`0.000`
	`7`		H	`26`	`7`	`12453`	`◊`	D	x,y-1,z+1	`1_546`	`35`	`10`	`12213`	`244.6`	`3.7`	`0.805`	`5`	`4`	`0`	`0.000`
	`8`		F	`21`	`6`	`12334`	`◊`	B	x,y,z	`1_555`	`34`	`9`	`12292`	`236.2`	`4.4`	`0.866`	`4`	`6`	`0`	`0.000`
	*Average:*													`324.4`	`1.7`	`0.649`	`5`	`4`	`0`	`0.000`
3	`9`		P	`27`	`5`	`919`	`◊`	H	x,y,z	`1_555`	`42`	`14`	`12453`	`308.4`	`-3.7`	`0.449`	`2`	`0`	`0`	`0.061`
4	`10`		N	`30`	`5`	`897`	`◊`	D	x,y,z	`1_555`	`40`	`11`	`12213`	`306.0`	`-4.1`	`0.432`	`1`	`0`	`0`	`0.048`
	`11`		M	`29`	`6`	`1000`	`◊`	B	x,y,z	`1_555`	`38`	`12`	`12292`	`297.4`	`-4.4`	`0.391`	`2`	`0`	`0`	`0.048`
	*Average:*													`301.7`	`-4.2`	`0.411`	`2`	`0`	`0`	`0.048`
5	`12`		O	`25`	`5`	`884`	`◊`	F	x,y,z	`1_555`	`36`	`12`	`12334`	`299.6`	`-3.8`	`0.509`	`3`	`2`	`0`	`0.170`
6	`13`		M	`31`	`6`	`1000`	`◊`	H	x,y,z	`1_555`	`35`	`8`	`12453`	`294.6`	`-4.8`	`0.339`	`0`	`0`	`0`	`0.063`
	`14`		N	`24`	`5`	`897`	`◊`	F	x,y,z	`1_555`	`30`	`6`	`12334`	`245.9`	`-5.0`	`0.239`	`0`	`0`	`0`	`0.063`
	*Average:*													`270.2`	`-4.9`	`0.289`	`0`	`0`	`0`	`0.063`
7	`15`		B	`31`	`10`	`12292`	`◊`	H	x-1,y,z	`1_455`	`27`	`12`	`12453`	`268.4`	`3.7`	`0.755`	`6`	`2`	`0`	`0.000`
	`16`		B	`22`	`10`	`12292`	`◊`	F	x-1,y,z	`1_455`	`22`	`7`	`12334`	`187.6`	`2.1`	`0.761`	`5`	`3`	`0`	`0.000`
	*Average:*													`228.0`	`2.9`	`0.758`	`6`	`3`	`0`	`0.000`
8	`17`		D	`31`	`12`	`12213`	`◊`	H	x-1,y+1,z-1	`1_464`	`27`	`11`	`12453`	`264.8`	`5.5`	`0.835`	`7`	`2`	`0`	`0.000`
9	`18`		D	`26`	`7`	`12213`	`◊`	E	x-1,y+1,z	`1_465`	`27`	`8`	`2992`	`249.3`	`-2.5`	`0.372`	`4`	`0`	`0`	`0.107`
	`19`		C	`27`	`8`	`2990`	`◊`	F	x-1,y+1,z	`1_465`	`24`	`6`	`12334`	`247.7`	`-2.3`	`0.382`	`4`	`0`	`0`	`0.107`
	`20`		A	`28`	`8`	`2995`	`◊`	H	x-1,y+1,z	`1_465`	`23`	`6`	`12453`	`239.3`	`-2.2`	`0.370`	`4`	`0`	`0`	`0.107`
	`21`		B	`26`	`7`	`12292`	`◊`	G	x-1,y+1,z	`1_465`	`25`	`7`	`2875`	`235.5`	`-2.6`	`0.325`	`3`	`0`	`0`	`0.107`
	*Average:*													`243.0`	`-2.4`	`0.362`	`4`	`0`	`0`	`0.107`
10	`22`		[BEN]D:2001	`9`	`1`	`281`	`f`	D	x,y,z	`1_555`	`32`	`15`	`12213`	`191.1`	`5.5`	`0.460`	`4`	`0`	`0`	`0.000`
	`23`		[BEN]B:2001	`9`	`1`	`276`	`f`	B	x,y,z	`1_555`	`32`	`16`	`12292`	`188.6`	`5.3`	`0.454`	`4`	`0`	`0`	`0.000`
	*Average:*													`189.9`	`5.4`	`0.457`	`4`	`0`	`0`	`0.000`
11	`24`		[BEN]F:2001	`9`	`1`	`279`	`f`	F	x,y,z	`1_555`	`37`	`16`	`12334`	`188.4`	`5.4`	`0.462`	`4`	`0`	`0`	`0.000`
	`25`		[BEN]H:2001	`9`	`1`	`276`	`f`	H	x,y,z	`1_555`	`30`	`16`	`12453`	`187.6`	`5.7`	`0.463`	`4`	`0`	`0`	`0.000`
	*Average:*													`188.0`	`5.5`	`0.462`	`4`	`0`	`0`	`0.000`
12	`26`		[BGC]H:4201	`12`	`1`	`306`	`f`	H	x,y,z	`1_555`	`23`	`10`	`12453`	`177.0`	`2.0`	`0.300`	`4`	`0`	`0`	`0.000`
13	`27`		[BGC]F:4203	`12`	`1`	`310`	`f`	F	x,y,z	`1_555`	`27`	`10`	`12334`	`170.2`	`3.3`	`0.409`	`3`	`0`	`0`	`0.000`
14	`28`		P	`24`	`5`	`919`	`◊`	D	x,y-1,z+1	`1_546`	`21`	`6`	`12213`	`160.8`	`-2.5`	`0.395`	`1`	`0`	`0`	`0.000`
15	`29`		O	`17`	`4`	`884`	`◊`	B	x,y,z	`1_555`	`18`	`4`	`12292`	`159.0`	`-2.9`	`0.352`	`0`	`0`	`0`	`0.000`
16	`30`		B	`23`	`8`	`12292`	`◊`	D	x,y-1,z+1	`1_546`	`14`	`3`	`12213`	`150.6`	`0.8`	`0.626`	`1`	`0`	`0`	`0.000`
	`31`		H	`17`	`8`	`12453`	`◊`	F	x,y-1,z+1	`1_546`	`7`	`2`	`12334`	`86.7`	`1.7`	`0.702`	`1`	`0`	`0`	`0.000`
	`32`		H	`7`	`2`	`12453`	`◊`	F	x,y,z	`1_555`	`13`	`7`	`12334`	`77.2`	`1.3`	`0.661`	`1`	`0`	`0`	`0.000`
	*Average:*													`104.9`	`1.3`	`0.663`	`1`	`0`	`0`	`0.000`
17	`33`		[NAG]D:1416	`10`	`1`	`348`	`cf`	D	x,y,z	`1_555`	`14`	`6`	`12213`	`118.4`	`2.7`	`0.316`	`0`	`0`	`0`	`0.000`
18	`34`		[NAG]H:1416	`9`	`1`	`354`	`cf`	H	x,y,z	`1_555`	`12`	`5`	`12453`	`106.2`	`2.1`	`0.304`	`1`	`0`	`0`	`0.000`
	`35`		[NAG]F:1416	`9`	`1`	`354`	`cf`	F	x,y,z	`1_555`	`9`	`4`	`12334`	`104.6`	`1.8`	`0.282`	`0`	`0`	`0`	`0.000`
	*Average:*													`105.4`	`1.9`	`0.293`	`1`	`0`	`0`	`0.000`
19	`36`		D	`23`	`8`	`12213`	`◊`	B	x,y,z	`1_555`	`12`	`4`	`12292`	`105.7`	`1.4`	`0.707`	`1`	`0`	`0`	`0.000`
20	`37`		D	`11`	`4`	`12213`	`◊`	F	x-1,y,z	`1_455`	`9`	`7`	`12334`	`100.3`	`3.6`	`0.906`	`2`	`2`	`0`	`0.000`
21	`38`		[NAG]B:1416	`9`	`1`	`349`	`cf`	B	x,y,z	`1_555`	`9`	`5`	`12292`	`97.2`	`1.8`	`0.304`	`0`	`0`	`0`	`0.000`
22	`39`		[BGC]B:4202	`8`	`1`	`309`	`f`	F	x,y,z	`1_555`	`14`	`5`	`12334`	`86.6`	`-0.4`	`0.125`	`0`	`0`	`0`	`0.015`
23	`40`		[BGC]B:4202	`7`	`1`	`309`	`◊`	B	x,y,z	`1_555`	`10`	`2`	`12292`	`85.4`	`0.4`	`0.206`	`1`	`0`	`0`	`0.000`
24	`41`		[NA]D:1500	`1`	`1`	`125`	`f`	D	x,y,z	`1_555`	`20`	`11`	`12213`	`84.5`	`-11.3`	`0.000`	`0`	`0`	`0`	`0.440`
	`42`		[NA]F:1500	`1`	`1`	`125`	`f`	F	x,y,z	`1_555`	`19`	`12`	`12334`	`82.9`	`-11.4`	`0.000`	`0`	`0`	`0`	`0.440`
	`43`		[NA]B:1500	`1`	`1`	`125`	`f`	B	x,y,z	`1_555`	`21`	`12`	`12292`	`82.0`	`-11.1`	`0.000`	`0`	`0`	`0`	`0.440`
	`44`		[NA]H:1500	`1`	`1`	`125`	`f`	H	x,y,z	`1_555`	`17`	`10`	`12453`	`80.7`	`-11.2`	`0.000`	`0`	`0`	`0`	`0.440`
	*Average:*													`82.5`	`-11.2`	`0.000`	`0`	`0`	`0`	`0.440`
25	`45`		[NAG]H:1417	`8`	`1`	`358`	`cf`	[NAG]H:1416	x,y,z	`1_555`	`7`	`1`	`354`	`78.0`	`2.4`	`0.112`	`1`	`0`	`0`	`0.000`
26	`46`		[NAG]F:1417	`10`	`1`	`367`	`cf`	[NAG]F:1416	x,y,z	`1_555`	`7`	`1`	`354`	`76.6`	`1.5`	`0.071`	`0`	`0`	`0`	`0.000`
27	`47`		A	`10`	`3`	`2995`	`◊`	G	x-1,y+1,z	`1_465`	`10`	`3`	`2875`	`69.4`	`-1.5`	`0.456`	`0`	`0`	`0`	`0.190`
	`48`		C	`9`	`3`	`2990`	`◊`	E	x-1,y+1,z	`1_465`	`11`	`3`	`2992`	`67.4`	`-1.3`	`0.489`	`0`	`0`	`0`	`0.190`
	*Average:*													`68.4`	`-1.4`	`0.473`	`0`	`0`	`0`	`0.190`
28	`49`		[NA]B:1501	`1`	`1`	`125`	`f`	B	x,y,z	`1_555`	`4`	`4`	`12292`	`62.9`	`-12.5`	`0.000`	`0`	`0`	`0`	`0.294`
29	`50`		[NA]C:3200	`1`	`1`	`125`	`◊`	E	x-1,y+1,z	`1_465`	`9`	`5`	`2992`	`37.2`	`-4.1`	`0.000`	`0`	`0`	`0`	`0.842`
	`51`		A	`7`	`4`	`2995`	`◊`	[NA]G:1501	x-1,y+1,z	`1_465`	`1`	`1`	`125`	`34.2`	`-3.6`	`0.000`	`0`	`0`	`0`	`0.842`
	`52`		[NA]C:3200	`1`	`1`	`125`	`◊`	C	x,y,z	`1_555`	`8`	`3`	`2990`	`29.8`	`-3.0`	`0.000`	`0`	`0`	`0`	`0.842`
	`53`		[NA]G:1501	`1`	`1`	`125`	`◊`	G	x,y,z	`1_555`	`4`	`3`	`2875`	`29.6`	`-2.9`	`0.000`	`0`	`0`	`0`	`0.842`
	*Average:*													`32.7`	`-3.4`	`0.000`	`0`	`0`	`0`	`0.842`
30	`54`		B	`3`	`1`	`12292`	`◊`	[NA]G:1501	x-1,y+1,z	`1_465`	`1`	`1`	`125`	`27.4`	`-2.6`	`0.000`	`0`	`0`	`0`	`0.060`
	`55`		[NA]G:1501	`1`	`1`	`125`	`◊`	H	x,y,z	`1_555`	`3`	`1`	`12453`	`26.9`	`-2.6`	`0.000`	`0`	`0`	`0`	`0.060`
	`56`		[NA]C:3200	`1`	`1`	`125`	`◊`	D	x,y,z	`1_555`	`4`	`1`	`12213`	`26.1`	`-2.3`	`0.000`	`0`	`0`	`0`	`0.060`
	`57`		[NA]C:3200	`1`	`1`	`125`	`◊`	F	x-1,y+1,z	`1_465`	`3`	`1`	`12334`	`25.4`	`-2.4`	`0.000`	`0`	`0`	`0`	`0.060`
	*Average:*													`26.4`	`-2.5`	`0.000`	`0`	`0`	`0`	`0.060`
31	`58`		[NAG]H:1417	`3`	`1`	`358`	`f`	H	x,y,z	`1_555`	`4`	`2`	`12453`	`19.2`	`0.5`	`0.348`	`0`	`0`	`0`	`0.000`
32	`59`		B	`2`	`2`	`12292`	`◊`	H	x-1,y+1,z	`1_465`	`2`	`2`	`12453`	`12.8`	`-0.3`	`0.379`	`0`	`0`	`0`	`0.003`
	`60`		D	`2`	`2`	`12213`	`◊`	F	x-1,y+1,z	`1_465`	`3`	`2`	`12334`	`12.3`	`-0.3`	`0.415`	`0`	`0`	`0`	`0.003`
	*Average:*													`12.5`	`-0.3`	`0.397`	`0`	`0`	`0`	`0.003`
33	`61`		[BGC]B:4202	`2`	`1`	`309`	`◊`	O	x,y,z	`1_555`	`1`	`1`	`884`	`10.5`	`0.1`	`0.373`	`0`	`0`	`0`	`0.000`

PDBe PISA v1.52 [20/10/2014]

Protein Data Bank
in Europe

Bringing Structure to Biology

PDBePISA

Protein Data Bank in Europe

Bringing Structure to Biology

PDBePISA

Protein Data Bank
in Europe