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InterPro-Version: 108.0
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{
"metadata": {
"accession": "F9NSS8",
"id": "F9NSS8_9ACTN",
"source_organism": {
"taxId": "1051006",
"scientificName": "[Propionibacterium] namnetense SK182B-JCVI",
"fullName": "[Propionibacterium] namnetense SK182B-JCVI"
},
"name": "RecBCD enzyme subunit RecB",
"description": [
"A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit contributes ATPase, 3'-5' helicase, exonuclease activity and loads RecA onto ssDNA"
],
"length": 1079,
"sequence": "MTTEASFDITKPLPQGTVLLAASAGTGKTWTISAVCAKAIATGMVHMENLLLVTFNRSAARELHGRVYERLLNTRLLLAGSREPSDPCDESLLELGREGLARVESALDTFDRAVITTTHEFASRMLVELGALSDHDPSSALMTDLTPLATEVSDDHYLAQYLDCDWPPSVHEKRKLSRDVAVKYGEVPISSEEGAETSSQDVLWAQSVREDVRRRSKSRAVHTFDDLIGDLVGALRDPYRGPLACATLAHRFELVMVDEFQDTDPLQWEILRRAFHGHSNLWLIGDPKQSIYAFRGADVHAYQDAARSASHVLHLDVNYRADKPIVEAVNTLFGNAQLGHGVPMEPVTAHHQESRIKTAATDGPRYHWSQPFQIRCLQVPADAQQDTADSDQFVAEDLVNQVVMMLEGGTVIAGDDDEERPLCPNDIAILVRTRRRGAELATALSQAHQPAVFSGASPVWSSQATEDLITLLEALENTDERLRTRLYLSDLIGATPADLAVSDSRVRSDLAIDLARWSSTWTMTGVWGTVEAALHRPGVLVRLVSMAGGERYVTDLRQVAQKAHVAACEGRLTATATAAWIREQQQLPGDDDPRRLDSDQQAVRVMTIHEAKGLGFPVVLLPDIANGWAPKKSVSGPIVWHDGQRRVLSISSQATDRSIALESHEEDERGENLRLLYVALTRARSAVRLWWSPCNRRNQWSAFQRLVEMDRTTGELGLGTAKTNPGTLPWLNSGPIATAIAPANQKLLTRTVSAQARAYANPRTLTRPLDTAFVRTSYSGLTANLHTAAAAPTTNTLIDEPVDGESVDDTAPGLCGLPGGTSFGTLVHTVLEYIDTTAADLSGEVLSITRRTLRTSPLPDVPSAELATGLEQVLHSGLGPLAPGMTLADFSPADRLAEMNFELAMTQSGQSATITDLASLLCDPGLVPPEDPISGYGEILAHVPNGDKALRGFLTGSIDAVLRRPDGRHLVVDYKTNRIPGVHRLSPHMYDVRTMRAMMFSSHYPLQGLLYSAALHRFLASSLPGYDPATHLGPIGYLFVRGMADRPVPDGEMPDGVFTWHPKPELIEAISERLGGLHD",
"proteome": null,
"gene": "recB",
"go_terms": [
{
"identifier": "GO:0005524",
"name": "ATP binding",
"category": {
"code": "F",
"name": "molecular_function"
}
},
{
"identifier": "GO:0016787",
"name": "hydrolase activity",
"category": {
"code": "F",
"name": "molecular_function"
}
},
{
"identifier": "GO:0008854",
"name": "exodeoxyribonuclease V activity",
"category": {
"code": "F",
"name": "molecular_function"
}
},
{
"identifier": "GO:0006281",
"name": "DNA repair",
"category": {
"code": "P",
"name": "biological_process"
}
},
{
"identifier": "GO:0003677",
"name": "DNA binding",
"category": {
"code": "F",
"name": "molecular_function"
}
},
{
"identifier": "GO:0003678",
"name": "DNA helicase activity",
"category": {
"code": "F",
"name": "molecular_function"
}
}
],
"protein_evidence": 3,
"source_database": "unreviewed",
"is_fragment": false,
"in_alphafold": true,
"in_bfvd": false,
"ida_accession": "a5fb392637a0d8a9ca3f9b8535db2db58f75550b",
"counters": {
"domain_architectures": 18996,
"entries": 22,
"isoforms": 0,
"proteomes": 0,
"sets": 4,
"structures": 0,
"taxa": 1,
"dbEntries": {
"profile": 2,
"cathgene3d": 3,
"pfam": 3,
"ssf": 2,
"cdd": 2,
"hamap": 1,
"panther": 1,
"interpro": 8
},
"proteome": 0,
"taxonomy": 1,
"similar_proteins": 18996
}
}
}