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InterPro-Version: 108.0
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{
"metadata": {
"accession": "F9F6A3",
"id": "F9F6A3_FUSOF",
"source_organism": {
"taxId": "660025",
"scientificName": "Fusarium oxysporum (strain Fo5176)",
"fullName": "Fusarium oxysporum (strain Fo5176) (Fusarium vascular wilt)"
},
"name": "Protein DOM34 homolog",
"description": [
"Component of the Dom34-Hbs1 complex, a complex that recognizes stalled ribosomes and triggers the No-Go Decay (NGD) pathway (PubMed:20890290). In the Dom34-Hbs1 complex, dom34 recognizes ribosomes stalled at the 3' end of an mRNA and engages stalled ribosomes by destabilizing mRNA in the mRNA channel. Following ribosome-binding, the Dom34-Hbs1 complex promotes the disassembly of stalled ribosomes, followed by degradation of damaged mRNAs as part of the NGD pathway"
],
"length": 400,
"sequence": "MKLVSRKVPNSLADETVSLLPEDPEDMWHAYNLILSGDIIHAHTVRKVVVYSDTGSSKSERFHTELAIKVKSTSFDPIISSLRVSGTIILENQHAALGSHHTLDLEVNRPFTIIKPEGWDSVARATLQEALSDDKDGAVAAVVMQEGLANICLITPFRTVLKVRVESVIPKKRDLASDQDAGMRRFFEKTLSTLLRTMDFTQSRPLLLASPGFVAGDFKQYIANQGRDKADKVLTAVAKQATVVHSNSGHVHSLNEILKSPEVLAKMKDMKFARETQYVDQFFDMLKLDDGRAWYGTSAVEKAVKDGAVGPGGGVLLVNNSLFRSEDLALRKKYVALVDKVRGDGGEARILSSDHESGQRLTMLGDIAAILNYPMLDLDEDDSDEDNEATGEPTMENSVI",
"proteome": null,
"gene": "FOXB_01939",
"go_terms": [
{
"identifier": "GO:0070481",
"name": "nuclear-transcribed mRNA catabolic process, non-stop decay",
"category": {
"code": "P",
"name": "biological_process"
}
},
{
"identifier": "GO:0070966",
"name": "nuclear-transcribed mRNA catabolic process, no-go decay",
"category": {
"code": "P",
"name": "biological_process"
}
},
{
"identifier": "GO:0071025",
"name": "RNA surveillance",
"category": {
"code": "P",
"name": "biological_process"
}
}
],
"protein_evidence": 3,
"source_database": "unreviewed",
"is_fragment": false,
"in_alphafold": true,
"in_bfvd": false,
"ida_accession": "e72b72a02812a5b73903042bf0d2988bdd1a81f2",
"counters": {
"domain_architectures": 4601,
"entries": 20,
"isoforms": 0,
"proteomes": 0,
"sets": 2,
"structures": 0,
"taxa": 1,
"dbEntries": {
"pfam": 3,
"ssf": 3,
"smart": 1,
"cathgene3d": 3,
"panther": 1,
"ncbifam": 1,
"interpro": 8
},
"proteome": 0,
"taxonomy": 1,
"similar_proteins": 4601
}
}
}