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{
"metadata": {
"accession": "A0A6J2V3F0",
"id": "A0A6J2V3F0_CHACN",
"source_organism": {
"taxId": "29144",
"scientificName": "Chanos chanos",
"fullName": "Chanos chanos (Milkfish)"
},
"name": "Cadherin-23",
"description": [
"Cadherins are calcium-dependent cell adhesion proteins. They preferentially interact with themselves in a homophilic manner in connecting cells. CDH23 is required for establishing and/or maintaining the proper organization of the stereocilia bundle of hair cells in the cochlea and the vestibule during late embryonic/early postnatal development. It is part of the functional network formed by USH1C, USH1G, CDH23 and MYO7A that mediates mechanotransduction in cochlear hair cells. Required for normal hearing"
],
"length": 3366,
"sequence": "MLWHVGSGRMILAKLLLSSFLLHSFSEAFNQPPRFQNYFFQSYLLIYENTPVGASVAQLQAVDPDEEPLIFGVVGEEATRYFAVQENTGMVWLRQPLDRETKSEMQVEFTVSDSQGVVKDTVNIQIGDVNDNAPTFHSQPYTVHIPENTPVGTSVFMVNATDPDQGTGGSVLFSFQPPSRFFSIDGARGTVTVIRPLDYETTSAYQLTVNATDQDKRRPLSSLANLAITITDVQDMDPIFTNLPYSTNIEENSPPGYEVRKITAIDQDQGRPRGIGYTIVSGNTNSMFALDYISGSLTVNGQLDRENPLYSAGFTLTVKGTELNDDRTPSSATVMTTFTILIIDKNDNAPKFNATEYRVRITELAQVGFALPLFIQVEDKDEGVNSIFQVVLTGNNSEHFTISPTSVQGRADIRMRVAVPLDYENIRSYSFSLYANESLSEHVGFARVFIELINENDNRPVFSQTLYNISLPESTTPGTSLVRIQATDNDIGTFGVVRYFFSEEPDQFSLDEETGLVTLRDRLDYELMRRFTLTVLARDGGGEETTGRLRVNVLDVNDNAPVFQKEAYMGSLRENEQAPQQVARVRATDEDSPPNNILTYSIIYASQFRNYFRITMVEGYAVITVDRPLDYELVPGGMIYLTFMARDGGNPPLNSTVPITVELLDENDNPPEFSQSSYIIKIPENIVAGATVLFVNATDLDASREFGQASLIYSLQGSTQFRLNTRSGEITTTALLDREVKSEYILIVRAVDGGVGPLQKTGIATVNITILDINDNAPVWQDEPYRANVVEMSPIDTDVISVLAVDRDNGVNGTVVYSISPQNPFYTINSNTGKIRTSGAVLDRESRDPRATQLMRTIIVSATDLGTPPLQSSVSTTVFVNLLDLNDNDPAFLNLPFVAEVPEGLPIGSSVYRVQVSDPDEDENGMVTMALQMGMPRLDFRLNTSTGVLVSTATLDREQIALYFLRIIAYDAGQYPRTSTSTLTITILDVNDETPTFFPHVYNVSLEENVPRNHVVSRLNCSDNDAGLNAELSYFITGGNQDGKFSVGFRNGVVRTVVGLDRETQASYTLIIEAIDNGPAGGRKTGTATIYVEVLDVNDNRPIFLQNSYETSILETVPRGTSILQVQATDADQGENGRVLYRILSGNSGRRFSIDQLTGLLTRGERALDRETSSSHVLEVEAYNSDQGSMRSSVRVIVYVEDANDEFPVFTQQQYNRLGLRETAGIGTSVIVVRATDPDTGDGGAVAYALVSGSDRKFEVDVSTGLVTTVDYLDYETKTSYLMNVSATDQSPPFHRGFCTVYVTLLNELDEAVAFFSSGYEASIRENIATGTEVVQVQAQSADNLNQLTYRFDPDTSPAALALFKIDSVTGRITVTGLVDRERGDSYTLTVVADDGGPKRDSTVKVSITILDENDNSPEFDITSDLSVSIPEDTPIGQRVAVVLGRDKDAGNNGLVNFTLVAGNMQDVFEIRTVNHTYGEIYVNAALDREAVDRYLLRVRAMDNGSPPRYTDRSLTINILDVNDNTPVVQSPRGYNVSVSENVGGGTSVLRVVATDRDIGPNAMLSYYITAGNQDLTFRMDRITGEMVTRPSPPDRERQQEYQLTVTVEDDGTPPRSTSTTVWVRIVDENDNAPEFPEEEYVTVLSEGPETVGATIATVTAIDPDEGLNGTLRYSIAQGNLGQTFRIYSNTGMIVVVKELDYEISNGHYTLVVTATDQCPIPALRLTSSTTVLINVIDVNDVTPTFPKAFEGPFEVTEGQPGPRVLTLRATDQDSGLNGKVEYSITAGDLKSEFVVSPVEGELRVRRDVELDRETTAYYNITVTARDLGTPPLSSTVVVGVVVLDINDNDPVLLNLPYNTSVSEAAAIHTSVARIQATDSDSGRNALLTYNITGGNMDGAFYINDTTGVVLVNRPLDRERVSEYKLTITVKDNPENPRIARRDSDSLVITVLDENDNKPIFTQTSYRAEISENSPPGTSVLVLNGPVLAVDKDLGQNAVVRYRLLGSRVDLFTVDALTGVVSVRRGAVLDREAFSEPRVELFLVGEDIGGLNSSVPLSITILDQNDNPPVFNPPSFTVHLPENSPTGVVVTQLSATDADSGSNGWLLYRLEGGAQDRFVVDSLSGAVLVGNATLDREERPSYRLVVVATDRGTPPLSGTATLSVVLDDVNDSRPRFLEPVQTINVNESTPPGVVVATLTAEDPDLRPRLEYYIISVEAKDDGNNPVDGLQESFGIDFHTGAVFVRNPLNRELVATFEIIVSVHDNASDVIHQSVSVPNAKLTVNVLDVNDNAPRFRPFGVANFSEKILEGAQPGTTLLSVSAVDPDKGPNGQVIYQLLHLPRGDYVRLEDPSTGKIVANRTVDFEQVQWLNFTVRAQDHGSPPRFAELPVYLRIVDVNDNNPIFTQPSYQKPVFEDIALGTIIVRVSATDADSGLFSVIEYSLVDGEGKFGITPSTGDIYILSPLDRETKDHYTLTAIARDNPGGSPNNRRENSVQVLITVLDVNDFRPRFSERVFSTSVFENEPSGTSVITLTATDLDEGENALLTYSLQGPGADAFSLDADTGLVRSVRLLQSFERFNLTIVATDHGRPPLWGTASLHITVIDVNDNRPVFVRPANGTIMHILEEQPPGLVVYEVFATDEDEGVNGEVRYGFLQTGAGNRDWENFHIDPLTGVITTAVKLDREKQALHSLIVVAYDLGQPVPYETTQPLQVALSDIDDNEPVFLKPPRGSLPYQSLSVPEHSAPGTVVGNVTGAVDADEGSNAVVYYFIAGGDTEGNFGLSTAGVLRVRKDLDREEIPIYSIIIKASSNRNWSLPRSQKSNRAWALDPSHDPTLQEVRIYLEDINDQPPRFTKLEYTAGVAADAKVGSDLIRVQAIDNDIGNNSLVLYHILSIRYIKLQSNDSEDIGNVFIIGETDGIIRTFDLFTAYDPGYFVVEVLARDLAGHSDVAMVGIYILRDDQRVKIVINEIPERVRLFQEEFVNLLSNITGAIVNTDDVQFHVDKKGRVNFAQTDVLIHVVNKQTNRILDVERVIQMIDENKEQLRNLFRNYNILDVQPAVSGRAPDDLTTLQMAIIILAVLLFLAAMLFIFMNWYYRTVHKRKLKAIVAGSTGNQGLMDILDMPNTNKYSFEGANPVWLDPFCRNLELAAQAEHEDDLPENLSDITDLWNSPARTHGTFGREPQASKPEDDRYLRAAIQEYDNIAKLGQIMREGPIKGSLLKVVLDDYLRLKKLFAARLVTKSTSHGDQSSVTELIQSDFDDDDDDRVGVTRGTLRFKHKLPVELRGPDGVHVVHGSTGTLLTSDLNSLPEDDQRALARSLEALHADGGIYAERNARTESAKSTPLHRNKGSDTLSESPLEITEL",
"proteome": "UP000504632",
"gene": "cdh23",
"go_terms": [
{
"identifier": "GO:0005509",
"name": "calcium ion binding",
"category": {
"code": "F",
"name": "molecular_function"
}
},
{
"identifier": "GO:0016020",
"name": "membrane",
"category": {
"code": "C",
"name": "cellular_component"
}
},
{
"identifier": "GO:0007156",
"name": "homophilic cell-cell adhesion",
"category": {
"code": "P",
"name": "biological_process"
}
},
{
"identifier": "GO:0007155",
"name": "cell adhesion",
"category": {
"code": "P",
"name": "biological_process"
}
},
{
"identifier": "GO:0005886",
"name": "plasma membrane",
"category": {
"code": "C",
"name": "cellular_component"
}
}
],
"protein_evidence": 4,
"source_database": "unreviewed",
"is_fragment": false,
"in_alphafold": false,
"in_bfvd": false,
"ida_accession": "3fbf2dc65d708052aa81e48e0b359fadef122630",
"counters": {
"domain_architectures": 620,
"entries": 12,
"isoforms": 0,
"proteomes": 1,
"sets": 2,
"structures": 0,
"taxa": 1,
"dbEntries": {
"cathgene3d": 1,
"ssf": 1,
"pfam": 1,
"cdd": 1,
"profile": 1,
"smart": 1,
"panther": 1,
"prosite": 1,
"prints": 1,
"interpro": 3
},
"proteome": 1,
"taxonomy": 1,
"similar_proteins": 620
}
}
}