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InterPro-Version: 108.0
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{
"metadata": {
"accession": "A0A667YLY8",
"id": "A0A667YLY8_9TELE",
"source_organism": {
"taxId": "586833",
"scientificName": "Myripristis murdjan",
"fullName": "Myripristis murdjan (pinecone soldierfish)"
},
"name": "U6 snRNA-associated Sm-like protein LSm4",
"description": [
"Binds specifically to the 3'-terminal U-tract of U6 snRNA",
"Plays a role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA"
],
"length": 143,
"sequence": "MLLQCVSQLALCVSQLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECYIRGSTIKYLRIPDEIIDMVKEEVVSKGRGRGGLQQNKQQGKGRGGGAGRGVFGGRGRGMPGAGRGQQQQDKKPGKPQGMKNQH",
"proteome": "UP000472263",
"gene": "LSM4",
"go_terms": [
{
"identifier": "GO:0003723",
"name": "RNA binding",
"category": {
"code": "F",
"name": "molecular_function"
}
},
{
"identifier": "GO:0000398",
"name": "mRNA splicing, via spliceosome",
"category": {
"code": "P",
"name": "biological_process"
}
},
{
"identifier": "GO:0000956",
"name": "nuclear-transcribed mRNA catabolic process",
"category": {
"code": "P",
"name": "biological_process"
}
},
{
"identifier": "GO:0006396",
"name": "RNA processing",
"category": {
"code": "P",
"name": "biological_process"
}
}
],
"protein_evidence": 3,
"source_database": "unreviewed",
"is_fragment": false,
"in_alphafold": true,
"in_bfvd": false,
"ida_accession": "83b18cf71a575d59c0de6840812ffe7912383fc4",
"counters": {
"domain_architectures": 70645,
"entries": 12,
"isoforms": 0,
"proteomes": 1,
"sets": 2,
"structures": 0,
"taxa": 1,
"dbEntries": {
"profile": 1,
"smart": 1,
"cathgene3d": 1,
"pfam": 1,
"cdd": 1,
"ssf": 1,
"panther": 1,
"interpro": 5
},
"proteome": 1,
"taxonomy": 1,
"similar_proteins": 70645
}
}
}